Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Hnrnpl'

Total of fusion sequences: 23 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_001533.2
1..145
98.0%
-
19

XM_017022867.1
141..917
99.4%
-
16
1
0
0
exon-exon
2
Mus musculus
SplGraphs
XM_006539558.2
1..289
99.0%
+
7

XR_001779966.1
285..432
100.0%
+
11
1
0
0
exon-exon
3
Mus musculus
SplGraphs
XM_006539558.2
2..363
100.0%
+
7

NM_133797.4
359..652
100.0%
-
13
1
0
0
intron-exon
4
Homo Sapiens

NM_001005335.1
1..124
96.8%
+
19

XR_243927.2
118..421
100.0%
+
19
0
1291
621
intron-intron
5
Homo Sapiens

NM_001533.2
3..366
98.4%
-
19

NM_001533.2
363..395
100.0%
+
19
2
762
788
exon-intron
6
Homo Sapiens

NM_001005335.1
26..190
95.2%
-
19

NM_001005335.1
185..247
100.0%
+
19
2
762
788
intron-intron
7
Homo Sapiens

NM_001005335.1
1..272
99.7%
-
19
HNRNPLP1 38..284
95.0%
-
6
2
476
985
exon-exon
8
Homo Sapiens
HNRNPLP1 1..126
98.5%
+
6

NM_001005335.1
10..142
99.3%
+
19
2
476
985
exon-exon
9
Mus musculus

XM_006539558.2
2..160
96.8%
+
7
4930579G24Rik
NM_029482.1
156..1992
100.0%
+
3
1
0
0
exon-exon
10
Mus musculus

XM_006539558.2
13..171
100.0%
+
7
4930579G24Rik
NM_029482.1
167..784
98.3%
+
3
1
0
0
exon-exon

T o p