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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HTT'

Total of fusion sequences: 19 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_002080.3
34..282
99.2%
-
16

NM_002111.8
277..449
99.5%
+
4
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_002111.8
2..183
98.9%
+
4

XR_429468.3
179..424
99.6%
-
15
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
NM_001017917.1
18..234
100.0%
+
17

NM_002111.8
233..627
100.0%
-
4
1
0
0
exon-exon
4
Homo Sapiens
SplGraphs
NM_002111.8
1..133
100.0%
+
4

NM_002111.8
125..447
99.4%
+
4
1
0
0
exon-intron
5
Mus musculus

NM_010414.3
6..197
100.0%
-
5

NM_001039156.1
191..334
99.4%
-
15
1
0
0
exon-intron
6
Mus musculus

NM_010414.3
12..130
99.2%
+
5

NM_138753.2
125..1488
100.0%
+
11
1
0
0
exon-exon
7
Homo Sapiens

NM_002111.8
12..824
99.1%
+
4
LOC100507521
XR_110911.3
809..830
95.5%
+
11
1
0
0
intron-intron
8
Mus musculus

NM_010414.3
6..404
99.8%
-
5

NM_001282945.1
394..730
100.0%
+
1
1
0
0
exon-exon
9
Mus musculus

NM_010414.3
13..592
100.0%
+
5

NR_028109.1
586..607
100.0%
-
13
1
0
0
exon-intron
10
Homo Sapiens

NM_002111.8
12..661
97.7%
+
4

NM_001042414.3
640..668
100.0%
+
13
1
0
0
intron-intron

T o p