Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'HNRNPD'

Total of fusion sequences: 24 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	-	16	17
Homo Sapiens	SplGraphs DB050538 ANNOTATION OF CHIMERA FUSION GenBank ID: DB050538 FASTA Head Gene (1) Alignment: HNRNPD | OMIM: 601324 Tail Gene (2) Alignment: ELL | OMIM: 600284 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3184 4 - 82373900 82373995 9 1 oncogene 8178 19 - 18444015 18444489 13 1 oncogene 567 hg38 Updated: 2019-02-21 Owner: ChiTaRS	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	1..96 100.0%	- 4	ELL P55199 Q75MS0 U3KQ90 U3KQA3 V9H027 XM_017027335.1	93..567 100.0%	- 19	1 0 0	exon-exon
Homo Sapiens	SplGraphs DA569517 ANNOTATION OF CHIMERA FUSION GenBank ID: DA569517 FASTA Head Gene (1) Alignment: RILPL2 | OMIM: 614093 Tail Gene (2) Alignment: HNRNPD | OMIM: 601324 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 196383 12 - 123423086 123436470 4 1 protein-coding 3184 4 - 82359578 82373473 3 1 oncogene 761 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to RRM_7 (PF16367, IPR000504) 94 173 200 0.041 0.400 RNA recognition motif RRM_1 (PF00076, IPR000504, SM00361) 70 266 335 3.7e-21 61.100 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NID (PF07292, IPR009909) 90 393 440 3.1e-06 14.100 Nmi/IFP 35 domain (NID) Updated: 2019-02-21 Owner: ChiTaRS	RILPL2 Q969X0 NM_145058.2	1..613 100.0%	- 12	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	613..761 98.7%	- 4	1 0 0	exon-exon
Homo Sapiens	SplGraphs AA010774 ANNOTATION OF CHIMERA FUSION GenBank ID: AA010774 FASTA Head Gene (1) Alignment: LAMB2 | OMIM: 150325 Tail Gene (2) Alignment: HNRNPD | OMIM: 601324 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3913 3 - 49125055 49125322 14 1 protein-coding 3184 4 - 82354138 82354190 9 1 oncogene 232 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Laminin_N (PF00055, IPR008211, SM00136) 234 47 281 4.8e-80 254.600 Laminin N-terminal (Domain VI) Laminin_EGF (PF00053, IPR002049, SM00180) 49 283 344 1.5e-10 27.400 Laminin EGF domain Updated: 2019-02-20 Owner: ChiTaRS	LAMB2 A0A024R319 F5H520 P55268 XM_005265127.4	1..183 99.5%	- 3	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	180..232 98.2%	- 4	1 0 0	exon-exon
Homo Sapiens	ChimerDB BU632297 ANNOTATION OF CHIMERA FUSION GenBank ID: BU632297 FASTA Head Gene (1) Alignment: SNU13 | OMIM: 601304 Tail Gene (2) Alignment: HNRNPD | OMIM: 601324 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4809 22 + 41674809 41674961 1 1 protein-coding 3184 4 + 82356883 82359640 6 1 oncogene 672 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to RRM_1 (PF00076, IPR000504, SM00361) 70 344 413 4.5e-21 60.800 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NID (PF07292, IPR009909) 90 471 518 3.7e-06 13.900 Nmi/IFP 35 domain (NID) Updated: 2019-02-21 Owner: ChiTaRS	SNU13 B1AHD1 P55769 Q6FHM6 NM_005008.3	19..171 100.0%	+ 22	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	170..646 99.6%	+ 4	1 0 0	exon-exon
Homo Sapiens	ChimerDB BM835099 ANNOTATION OF CHIMERA FUSION GenBank ID: BM835099 FASTA Head Gene (1) Alignment: HNRNPD | OMIM: 601324 Tail Gene (2) Alignment: NOL6 | OMIM: 611532 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3184 4 - 82373695 82373980 9 1 oncogene 65083 9 - 33465829 33466173 19 1 protein-coding 447 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Nrap (PF03813, IPR005554) 1003 90 476 2.4e-111 359.100 Nrap protein Updated: 2019-02-21 Owner: ChiTaRS	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	1..282 100.0%	- 4	NOL6 A0A0A0MRW6 A0A0C4DFX0 Q9H6R4 NM_022917.4	276..447 100.0%	- 9	1 0 0	exon-exon
Homo Sapiens	ChimerDB BE646088 ANNOTATION OF CHIMERA FUSION GenBank ID: BE646088 FASTA Head Gene (1) Alignment: HNRNPD | OMIM: 601324 Tail Gene (2) Alignment: VAMP2 | OMIM: 185881 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3184 4 + 82353986 82354105 1 1 oncogene 6844 17 + 8160134 8160339 5 1 protein-coding 339 hg38 Updated: 2019-02-20 Owner: ChiTaRS	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	17..136 97.5%	+ 4	VAMP2 F8WCA0 J3QRU4 K7ENK9 P63027 NM_014232.2	134..339 100.0%	+ 17	1 0 0	exon-exon
Homo Sapiens	BF096106 ANNOTATION OF CHIMERA FUSION GenBank ID: BF096106 FASTA Head Gene (1) Alignment: NFE2L2 | OMIM: 600492 Tail Gene (2) Alignment: HNRNPD | OMIM: 601324 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4780 2 - 177231581 177231778 1 1 oncogene 3184 4 + 82354119 82357446 9 1 oncogene 591 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to RRM_1 (PF00076, IPR000504, SM00361) 70 460 509 9.6e-09 21.300 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NID (PF07292, IPR009909) 90 480 527 3.8e-06 13.800 Nmi/IFP 35 domain (NID) Updated: 2019-02-20 Owner: ChiTaRS	NFE2L2 C9J0Y1 C9J1A8 C9J3K4 C9JBM0 C9JFL6 E2I973 H7C498 K7EIW5 K7ER33 Q16236 NM_001145413.3	16..213 99.5%	- 2	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	209..575 99.8%	+ 4	1 0 0	exon-exon
Homo Sapiens	BG999638 ANNOTATION OF CHIMERA FUSION GenBank ID: BG999638 FASTA Head Gene (1) Alignment: AC087564.1 Tail Gene (2) Alignment: HNRNPD | OMIM: 601324 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 16 + 51360593 51360638 0 0 3184 4 - 82362904 82363047 2 0 oncogene 465 hg38 Updated: 2019-02-08 Owner: ChiTaRS	AC087564.1	291..316 100.0%	+ 16	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	305..448 97.3%	- 4	1 0 0	intron-intron
Homo Sapiens	BE935692 ANNOTATION OF CHIMERA FUSION GenBank ID: BE935692 FASTA Head Gene (1) Alignment: HNRNPD | OMIM: 601324 Tail Gene (2) Alignment: HNRNPD | OMIM: 601324 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3184 4 + 82370665 82371000 7 0 oncogene 3184 4 - 82362880 82363058 2 0 oncogene 245 hg38 Updated: 2019-02-20 Owner: ChiTaRS	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	1..88 98.9%	+ 4	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	61..241 97.3%	- 4	1 0 0	intron-intron
Homo Sapiens	BG988244 ANNOTATION OF CHIMERA FUSION GenBank ID: BG988244 FASTA Head Gene (1) Alignment: HNRNPD | OMIM: 601324 Tail Gene (2) Alignment: TMEM67 | OMIM: 609884 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3184 4 + 82354032 82354317 1 0 oncogene 91147 8 + 93816697 93816923 1 1 protein-coding 518 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to RRM_1 (PF00076, IPR000504, SM00361) 70 466 514 2.6e-08 19.900 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NID (PF07292, IPR009909) 90 485 532 1.5e-05 11.900 Nmi/IFP 35 domain (NID) Updated: 2019-02-21 Owner: ChiTaRS	HNRNPD A0A024RDB4 A0A024RDF3 A0A024RDF4 D6RAF8 D6RBP9 D6RBQ9 D6RD83 D6RF44 H0Y8G5 H0YA96 Q14103 NM_031370.2	4..291 97.6%	+ 4	TMEM67 A0A0C4DFP8 A0A0S2Z5T9 A0A0S2Z611 C9JHI2 C9JRQ8 E5RG10 E5RH38 F8WCQ6 H0YAR5 H0YB69 H0YC18 Q5HYA8 XR_928362.3	292..518 99.2%	+ 8	1 0 0	intron-exon