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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HNRNPC'

Total of fusion sequences: 20 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_000993.4
1..463
99.8%
+
2

XM_011536708.1
464..548
97.7%
-
14
1
0
0
exon-exon
2
Homo Sapiens
1..738
98.3%
-
14
SPRR1A
P35321
723..742
100.0%
+
1
1
0
0
intron-intron
3
Homo Sapiens

NM_003099.4
1..165
100.0%
+
15

XM_011536708.1
166..567
99.8%
-
14
1
0
0
exon-intron
4
Homo Sapiens

XM_011536712.2
1..25
100.0%
+
14
OAT
P04181

NM_001322968.1
9..119
97.3%
-
10
1
0
0
intron-exon
5
Homo Sapiens

XM_011536712.2
39..308
96.5%
-
14

XM_017018280.1
303..334
100.0%
+
11
1
0
0
exon-intron
6
Homo Sapiens

XM_011536708.1
1..166
99.4%
+
14

XM_011536708.1
161..497
100.0%
+
14
1
0
0
intron-intron
7
Homo Sapiens

NM_001323574.1
104..255
99.4%
+
1

XM_011536708.1
250..642
96.7%
-
14
1
0
0
intron-intron
8
Homo Sapiens

XM_011536708.1
11..277
99.7%
-
14

XM_005254244.4
267..293
100.0%
-
15
1
0
0
exon-exon
9
Homo Sapiens

XM_011536712.2
1..288
100.0%
+
14
LOC100294362
Q8WYU1

NR_029376.1
282..434
100.0%
+
17
1
0
0
intron-intron
10
Homo Sapiens

XM_011536712.2
1..89
100.0%
-
14

NM_207417.2
78..100
100.0%
-
9
1
0
0
exon-intron

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