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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HNRNPA1'

Total of fusion sequences: 9 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_011669.3
1..23
100.0%
-
5

XR_383983.1
7..456
99.6%
-
15
1
0
0
intron-exonsrr037689-694_1
2
Mus musculus

NM_001039129.4
1..1801
100.0%
+
15
Gm8789 36..1812
98.2%
-
19
3
0
0
exon-exon
3
Mus musculus

NM_001039129.4
1..1960
100.0%
+
15
Gm8789 36..1971
97.5%
-
19
3
0
0
exon-exon
4
Mus musculus

NM_001039129.4
2..386
100.0%
+
15
Gm8789 8..399
99.0%
-
19
3
468
882
exon-exon
5
Mus musculus

NM_001039129.4
1..692
99.8%
+
15
Gm8789 11..807
98.3%
-
19
3
468
882
exon-exon
6
Mus musculus

XR_383983.1
1..294
100.0%
+
15

XM_011241905.2
265..320
97.7%
+
7
1
0
0
exon-intron
7
Mus musculus

XM_006511812.2
1..31
100.0%
+
9

NM_001039129.4
15..594
99.4%
-
15
1
0
0
intron-exon
8
Mus musculus

XR_383983.1
1..3116
100.0%
+
15

XM_006532537.3
3113..3133
100.0%
-
11
1
0
0
exon-intron
9
Mus musculus
Gm17057
XR_384452.2
9..46
97.4%
+
15

XR_383983.1
41..458
96.9%
-
15
1
0
0
intron-exon

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