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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HNRNPA1'

Total of fusion sequences: 16 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_014805.3
1..173
98.3%
+
3

XR_245923.2
164..312
100.0%
+
12
1
0
0
exon-exon
2
Homo Sapiens

NM_014805.3
2..105
96.2%
+
3

XR_245923.2
96..245
99.4%
+
12
1
0
0
exon-exon
3
Homo Sapiens

XR_245923.2
1..81
100.0%
+
12
HNRNPA1P31 17..87
97.2%
-
13
1
0
0
exon-exon
4
Homo Sapiens

XR_245923.2
1..86
98.9%
+
12
HNRNPA1P31 22..92
97.2%
-
13
1
0
0
exon-exon
5
Homo Sapiens

NM_031157.3
8..481
99.8%
-
12
SEPT2
Q15019

NM_001282973.1
481..511
100.0%
+
2
1
0
0
exon-exon
6
Homo Sapiens
AC004069.1 1..316
95.1%
+
4

XR_245923.2
16..563
100.0%
-
12
1
0
0
intron-exon
7
Homo Sapiens

NM_004776.3
6..390
99.3%
+
20

XR_245923.2
382..619
99.2%
+
12
1
0
0
exon-exon
8
Homo Sapiens

NM_031157.3
7..392
100.0%
+
12
AC025566.1 18..399
95.5%
-
3
1
0
0
exon-intron
9
Homo Sapiens
KRBOX1
C9JBD0

ENST00000426937
5..25
95.5%
-
3

XR_245923.2
18..656
100.0%
-
12
1
0
0
intron-exon
10
Homo Sapiens

NM_007052.4
1..53
97.1%
+
X

NM_031157.3
13..413
99.6%
-
12
1
0
0
intron-exon

T o p