Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'HMGN1'

Total of fusion sequences: 1 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	ChimerDB BI022386 ANNOTATION OF CHIMERA FUSION GenBank ID: BI022386 FASTA Head Gene (1) Alignment: MT-RNR2 Tail Gene (2) Alignment: HMGN1 | OMIM: 163920 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4550 MT + 4148 4229 NA NA rRNA 3150 21 - 40717946 40718140 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	MT-RNR2 Q8IVG9	11..89 100.0%	+ MT	HMGN1 A6NEL0 A6NL93 F2Z2W6 F2Z2Y5 H7BXJ5 P05114 Q3B790 Q6NSG7	90..284 100.0%	- 21	1 0 0