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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HM13'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_178581.2
1..164
98.2%
+
20

NM_014624.3
155..427
97.1%
-
1
2
0
4
intron-exon
2
Homo Sapiens
ChimerDB
NM_178581.2
1..165
97.6%
+
20

NM_014624.3
156..423
99.3%
-
1
2
0
4
intron-exon
3
Homo Sapiens
ChimerDB
NM_178581.2
1..131
97.1%
-
20

NM_001329395.1
88..453
99.8%
-
17
1
0
0
intron-intron
4
Homo Sapiens
SplGraphs
XM_006722926.2
211..266
98.3%
+
19

NM_178581.2
257..459
100.0%
+
20
1
0
0
intron-intron
5
Homo Sapiens

NM_152829.2
1..2616
100.0%
+
7

NM_178580.2
2142..2633
95.6%
-
20
1
0
0
exon-intron
6
Homo Sapiens

XM_006722926.2
211..266
98.3%
+
19

NM_178581.2
257..459
100.0%
+
20
1
0
0
intron-intron
7
Homo Sapiens

NM_014691.2
17..39
100.0%
-
15

NM_178581.2
35..266
100.0%
-
20
1
0
0
intron-intron
8
Homo Sapiens
HM13-AS1
NR_046853.2
12..434
100.0%
-
20

NM_178580.2
289..504
100.0%
-
20
1
0
0
intron-exon
9
Homo Sapiens

NM_178580.2
5..311
99.7%
+
20

XM_011535019.3
309..335
100.0%
+
13
1
0
0
exon-intron
10
Homo Sapiens

NM_178581.2
3..230
99.2%
+
20

NM_020376.3
218..407
99.0%
+
11
1
0
0
exon-exon

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