Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Sense-ANTIsense

Read-through Chimeras Mass-spec Hits Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'HLA-DQA1'

Total of fusion sequences: 8 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism Fusion:
Graphical View,
Annotation, PPI
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed, iHOP
reference
Name(s)1 Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2 Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1789,10,1112,2513,14,151617
Homo Sapiens ChimerDB 18..389
100.0%
-
15
HLA-DQA1
385..773
98.3%
-
6
1
0
0
Homo Sapiens
HLA-DQA1
1..348
99.8%
+
6
348..800
100.0%
+
6
1
0
0
HS245
Homo Sapiens HNRNPA1P69 10..33
100.0%
+
12
HLA-DQA1
20..499
97.9%
-
6
1
0
0
Homo Sapiens
HLA-DQA1
7..43
97.3%
-
6
25..46
100.0%
+
5
1
0
0
Homo Sapiens 1..110
96.4%
-
2
HLA-DQA1
107..313
98.1%
+
6
1
0
0
Homo Sapiens
HLA-DQA1
1..24
100.0%
-
6
COX3
6..103
98.0%
+
MT
1
0
0
Homo Sapiens
HLA-DQA1
21..274
98.9%
-
6
270..486
97.6%
-
12
1
0
0
Homo Sapiens 1..25
100.0%
+
18
HLA-DQA1
16..460
98.7%
-
6
1
0
0