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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'HLA-DPA1'

Total of fusion sequences: 19 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation, PPI
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed, iHOP
reference
Name(s)1 Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2 Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1789,10,1112,2513,14,151617
Homo Sapiens ChimerDB 16..183
100.0%
+
10
HLA-DPA1
180..539
97.8%
+
6
1
0
0
Homo Sapiens ChimerDB 14..132
95.0%
-
12
HLA-DPA1
133..196
98.5%
-
6
1
0
0
Homo Sapiens ChimerDB 1..58
100.0%
-
12
HLA-DPA1
59..122
98.5%
-
6
1
0
0
Homo Sapiens ChimerDB
HLA-DPA1
12..60
100.0%
-
6
SOX12
O15370
61..495
98.0%
+
20
1
0
0
Homo Sapiens ChimerDB
HLA-DPA1
1..407
99.8%
-
6
NEAT1 401..530
96.9%
+
11
1
0
0
Homo Sapiens ChimerDB LOC100129931 18..343
100.0%
+
4
HLA-DPA1
340..427
100.0%
+
6
1
0
0
Homo Sapiens 2..30
100.0%
-
19
HLA-DPA1
12..684
100.0%
-
6
1
0
0
Homo Sapiens LOC105378305 1..26
100.0%
+
10
HLA-DPA1
17..340
97.9%
+
6
2
90
0
Homo Sapiens LOC105378305 1..26
100.0%
+
10
HLA-DPA1
17..430
99.8%
+
6
2
90
0
Homo Sapiens
HLA-DPA1
1..188
99.5%
-
6
178..733
98.4%
+
3
1
0
0