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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HDGF'

Total of fusion sequences: 24 (from 1934659 parsed EST/mRNAs. Last update 2020-01-27 10:09:24)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001017.2
12..380
99.5%
-
11

NR_135008.1
372..554
99.0%
-
1
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
XM_006717049.3
22..103
100.0%
-
9

NR_135008.1
104..340
99.2%
-
1
1
0
0
exon-exon
3
Mus musculus
SplGraphs
XM_006501027.3
29..337
97.8%
+
3

XM_006501027.3
335..390
100.0%
+
3
6
385
204
exon-exon
4
Mus musculus
SplGraphs
XM_006532461.2
1..318
100.0%
-
11

NM_008231.4
313..523
99.1%
+
3
1
0
0
intron-exon
5
Mus musculus

XM_006501027.3
39..263
99.2%
-
3

XM_006501027.3
260..398
97.2%
+
3
6
197
0
exon-exon
6
Mus musculus

XM_006501027.3
40..264
99.6%
-
3

XM_006501027.3
261..394
100.0%
+
3
6
33
19
exon-exon
7
Mus musculus

XM_006501027.3
1..86
100.0%
-
3

XM_006501027.3
78..332
99.3%
+
3
6
33
19
exon-exon
8
Mus musculus

XM_006501027.3
40..134
99.0%
-
3

XM_006501027.3
134..220
97.8%
+
3
6
21
130
exon-exon
9
Mus musculus

XM_006501027.3
2..103
100.0%
-
3

XM_006501027.3
104..691
99.9%
+
3
6
0
0
intron-exon
10
Mus musculus

XM_006501027.3
2..103
99.1%
-
3

XM_006501027.3
104..378
99.3%
+
3
6
0
0
intron-exon

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