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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'HDAC4'

Total of fusion sequences: 15 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_011512223.2
1..2217
99.1%
-
2

NM_022817.2
2218..2240
99.1%
-
2
1
0
0
intron-intronBREAKPOINTs
29099951
2
Homo Sapiens

NM_017707.3
1..4102
100.0%
-
1

XM_011512221.1
4102..4129
100.0%
+
2
1
0
0
exon-intron
3
Homo Sapiens

XM_017007078.1
3..246
99.2%
+
3

XM_011512221.1
225..373
100.0%
-
2
3
0
8
exon-intron
4
Homo Sapiens

XM_017007078.1
3..248
99.2%
+
3

XM_011512221.1
227..367
100.0%
-
2
3
0
8
exon-intron
5
Homo Sapiens

XM_017007078.1
5..245
97.5%
+
3

XM_011512221.1
224..383
99.4%
-
2
3
0
11
exon-intron
6
Homo Sapiens

XM_011512223.2
1..622
99.6%
-
2

XM_017026125.1
621..644
100.0%
+
19
1
0
0
exon-intron
7
Homo Sapiens

XM_024453257.1
1..65
95.4%
+
2

XM_011512223.2
61..132
100.0%
-
2
1
0
0
intron-intron
8
Homo Sapiens

NM_014634.3
37..196
98.8%
-
22

XM_011512223.2
189..290
100.0%
-
2
1
0
0
exon-intron
9
Homo Sapiens

XM_005264381.4
6..104
100.0%
-
2

XM_011512221.1
86..105
100.0%
+
2
1
0
0
exon-intron
10
Homo Sapiens

XM_011512221.1
1..263
95.4%
-
2

NM_001242314.1
9..707
99.6%
+
3
1
0
0
intron-intron

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