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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'HDAC4'

Total of fusion sequences: 15 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_011512223.2
1..2217
99.1%
-
2

NM_022817.2
2218..2240
99.1%
-
2
1
0
0
intron-intronBREAKPOINTs
29099951
Homo Sapiens
NM_017707.3
1..4102
100.0%
-
1

XM_011512221.1
4102..4129
100.0%
+
2
1
0
0
exon-intron
Homo Sapiens
XM_017007078.1
3..246
99.2%
+
3

XM_011512221.1
225..373
100.0%
-
2
3
0
8
exon-intron
Homo Sapiens
XM_017007078.1
3..248
99.2%
+
3

XM_011512221.1
227..367
100.0%
-
2
3
0
8
exon-intron
Homo Sapiens
XM_017007078.1
5..245
97.5%
+
3

XM_011512221.1
224..383
99.4%
-
2
3
0
11
exon-intron
Homo Sapiens
XM_011512223.2
1..622
99.6%
-
2

XM_017026125.1
621..644
100.0%
+
19
1
0
0
exon-intron
Homo Sapiens
XM_024453257.1
1..65
95.4%
+
2

XM_011512223.2
61..132
100.0%
-
2
1
0
0
intron-intron
Homo Sapiens
NM_014634.3
37..196
98.8%
-
22

XM_011512223.2
189..290
100.0%
-
2
1
0
0
exon-intron
Homo Sapiens
XM_005264381.4
6..104
100.0%
-
2

XM_011512221.1
86..105
100.0%
+
2
1
0
0
exon-intron
Homo Sapiens
XM_011512221.1
1..263
95.4%
-
2

NM_001242314.1
9..707
99.6%
+
3
1
0
0
intron-intron

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