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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'GSE1'

Total of fusion sequences: 27 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_005255859.5
5..87
95.0%
+
16

NM_012293.2
83..395
97.4%
-
2
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB TRIM58
Q8NG06

NM_015431.3
1..607
99.7%
+
1

XM_005255859.5
601..6599
99.9%
+
16
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
XM_005255859.5
1..201
100.0%
+
16

NM_032228.5
199..759
97.6%
+
11
1
0
0
exon-exon
4
Homo Sapiens
SplGraphs
NM_031492.3
2..433
100.0%
-
11

XM_005255859.5
428..538
100.0%
+
16
1
0
0
exon-exon
5
Homo Sapiens

XM_006722586.3
15..267
95.1%
-
18

XM_017023083.1
99..502
100.0%
-
16
1
0
0
exon-intronVCAP
6
Homo Sapiens

XM_005255859.5
34..536
99.1%
-
16

XM_011528231.2
537..580
100.0%
-
19
1
0
0
exon-exonBREAKPOINTs
16461635
7
Homo Sapiens

XM_011528231.2
31..243
99.6%
+
19

XM_005255859.5
244..707
99.2%
+
16
1
0
0
exon-exonBREAKPOINTs
16461635
8
Homo Sapiens

XR_001751877.1
8..190
99.5%
-
16

XM_005255859.5
191..751
99.5%
-
16
0
31675
33972
intron-intron
9
Homo Sapiens

XR_001751877.1
1..176
97.8%
+
16

NM_014615.4
176..392
100.0%
-
16
0
31675
33972
intron-intron
10
Homo Sapiens

XM_005255859.5
6..512
100.0%
+
16

NM_198991.3
506..527
100.0%
+
18
1
0
0
exon-intron

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