Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'GPNMB'

Total of fusion sequences: 6 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_017018270.1
1..407
100.0%
-
11

XM_017011676.2
401..533
99.3%
+
7
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
XM_017011676.2
1..114
95.0%
+
7

XR_244086.4
115..482
100.0%
-
19
1
0
0
intron-exon
3
Homo Sapiens

XM_017011676.2
1..71
100.0%
+
7
LOC646708 55..81
96.3%
+
8
1
0
0
exon-exon
4
Homo Sapiens

XM_017021382.1
1..33
97.0%
-
14

XM_017011677.2
14..99
96.5%
+
7
1
0
0
exon-exon
5
Homo Sapiens

NM_004304.4
19..42
100.0%
-
2

XM_017011676.2
43..62
100.0%
-
7
1
0
0
intron-intron
6
Homo Sapiens

ENST00000594022
12..43
100.0%
+
19

XM_017011676.2
43..494
99.2%
-
7
1
0
0
intron-exon

T o p