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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'GPC3'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XM_006716263.4
1..317
98.8%
+
8

NM_001164617.1
308..369
100.0%
-
X
2
0
8
exon-exon
Homo SapiensSplGraphs
XR_002958896.1
1..205
100.0%
-
2

NM_001164617.1
204..390
97.9%
-
X
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_001164617.1
27..96
98.6%
+
X

XM_006716263.4
87..369
99.0%
-
8
2
0
8
exon-exon
Homo Sapiens ChimerDB
NM_001164617.1
4..202
100.0%
+
X

NM_001347828.1
196..348
100.0%
-
4
1
0
0
exon-exon
Homo Sapiens
NM_001164617.1
36..60
96.0%
-
X

XM_017013698.2
57..91
97.2%
-
8
1
0
0
exon-intron
Homo Sapiens RNA45SN2
NR_146144.1
5..182
98.9%
+
21

NM_001164617.1
178..226
98.0%
-
X
1
0
0
exon-intron
Homo Sapiens
NM_015343.4
1..209
99.6%
-
17

NM_001164617.1
206..279
97.3%
+
X
1
0
0
exon-intron
Homo Sapiens
NM_032940.2
1..1405
100.0%
+
16

NM_001164617.1
1395..1422
100.0%
-
X
1
0
0
exon-intron
Homo Sapiens
NM_001164617.1
6..39
96.8%
+
X
TH2LCRR
NR_132124.1
34..126
97.9%
-
5
1
0
0
intron-intron
Homo Sapiens
NR_120425.1
2..25
100.0%
+
6

NM_001164617.1
8..38
96.7%
+
X
1
0
0
intron-intron

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