Result for the search of Gene Name/NCBI ID(s): 'GNA12'

Total of fusion sequences: 10 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	ChimerDB BE883493 ANNOTATION OF CHIMERA FUSION GenBank ID: BE883493 FASTA Head Gene (1) Alignment: UBC | OMIM: 191340 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7316 12 - 124913301 124913774 1 1 protein-coding 2768 7 - 2787300 2787480 3 0 oncogene, protein-coding 941 hg38 Updated: 2019-02-20 Owner: ChiTaRS	UBC A8CGI2 F5GXK7 F5GYU3 F5GZ39 F5H265 F5H2Z3 F5H388 F5H6Q2 F5H747 L8B196 L8B4I8 L8B4J3 L8B4M0 L8B4R0 L8B4Z6 P0CG48 Q5PY61 Q5UGI3 Q96C32 Q96H31 NM_021009.6	18..494 98.8%	- 12	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	488..666 97.2%	- 7	1 0 0	exon-intron	Spes-1
2 Homo Sapiens	NG_061462 ANNOTATION OF CHIMERA FUSION GenBank ID: NG_061462 FASTA Head Gene (1) Alignment: BMPR2 | OMIM: 600799 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 659 2 + 202433211 202462738 0 0 tumor suppressor, protein-coding 2768 7 - 2770618 2803827 1 0 oncogene, protein-coding 495 hg38 Updated: 2019-03-30 Owner: ChiTaRS	BMPR2 A0A1W2PPB5 Q13873 XM_011511687.1	101..483 97.4%	+ 2	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	421..492 95.6%	- 7	1 0 0	intron-intron	1HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - NG_061462 BMPR2 2 202462676 202462738 202455277 7399 GNA12 7 2770618 2770680 2770366 252 GM12878 (CVCL_7526) 25497547
3 Homo Sapiens	BP358822 ANNOTATION OF CHIMERA FUSION GenBank ID: BP358822 FASTA Head Gene (1) Alignment: RPL17 | OMIM: 603661 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6139 18 - 49489373 49492479 7 1 protein-coding 2768 7 - 2753440 2754043 0 0 oncogene, protein-coding 536 hg38 Updated: 2019-03-31 Owner: ChiTaRS	RPL17 A0A087WWH0 A0A087WXM6 A0A087WY81 J3KRB3 J3KRX5 J3KSJ0 J3QLC8 J3QQT2 J3QS96 P18621 NM_001199343.1	2..529 100.0%	- 18	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	328..536 98.1%	- 7	3 0 2	exon-intron
4 Homo Sapiens	BP357747 ANNOTATION OF CHIMERA FUSION GenBank ID: BP357747 FASTA Head Gene (1) Alignment: RPL17 | OMIM: 603661 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6139 18 - 49489375 49492479 7 1 protein-coding 2768 7 - 2753439 2754043 0 0 oncogene, protein-coding 579 hg38 Updated: 2019-03-31 Owner: ChiTaRS	RPL17 A0A087WWH0 A0A087WXM6 A0A087WY81 J3KRB3 J3KRX5 J3KSJ0 J3QLC8 J3QQT2 J3QS96 P18621 NM_001199343.1	1..525 99.5%	- 18	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	326..535 97.2%	- 7	3 0 0	exon-intron
5 Homo Sapiens	BP357702 ANNOTATION OF CHIMERA FUSION GenBank ID: BP357702 FASTA Head Gene (1) Alignment: RPL17 | OMIM: 603661 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6139 18 - 49489375 49492479 7 1 protein-coding 2768 7 - 2753440 2754043 0 0 oncogene, protein-coding 536 hg38 Updated: 2019-03-31 Owner: ChiTaRS	RPL17 A0A087WWH0 A0A087WXM6 A0A087WY81 J3KRB3 J3KRX5 J3KSJ0 J3QLC8 J3QQT2 J3QS96 P18621 NM_001199343.1	2..527 99.9%	- 18	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	328..536 97.7%	- 7	3 0 0	exon-intron
6 Homo Sapiens	BM016356 ANNOTATION OF CHIMERA FUSION GenBank ID: BM016356 FASTA Head Gene (1) Alignment: RPL17P39 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 645296 15 - 71341117 71341448 1 1 pseudo 2768 7 - 2737274 2754043 0 0 oncogene, protein-coding 777 hg38 Updated: 2019-06-06 Owner: ChiTaRS	RPL17P39	1..330 99.4%	- 15	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	27..410 97.7%	- 7	1 0 0	exon-intron
7 Homo Sapiens	BF526580 ANNOTATION OF CHIMERA FUSION GenBank ID: BF526580 FASTA Head Gene (1) Alignment: GNA12 | OMIM: 604394 Tail Gene (2) Alignment: AL020994.2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2768 7 + 2767086 2767498 3 0 oncogene, protein-coding 4294900384 22 - 27368463 27368507 0 0 469 hg38 Updated: 2019-01-10 Owner: ChiTaRS	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282440.1	12..424 100.0%	+ 7	AL020994.2	423..467 100.0%	- 22	1 0 0	intron-intron
8 Homo Sapiens	AA525508 ANNOTATION OF CHIMERA FUSION GenBank ID: AA525508 FASTA Head Gene (1) Alignment: LOC107986760 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 107986760 7 + 2620759 2620864 0 0 ncRNA 2768 7 + 2773417 2773498 0 0 oncogene, protein-coding 510 hg38 Updated: 2019-11-15 Owner: ChiTaRS	LOC107986760 XR_001745069.1	48..153 95.5%	+ 7	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	154..234 95.5%	+ 7	1 0 0	intron-intron
9 Homo Sapiens	BP359738 ANNOTATION OF CHIMERA FUSION GenBank ID: BP359738 FASTA Head Gene (1) Alignment: RPL17P34 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 643863 10 - 93284069 93284588 1 1 pseudo 2768 7 - 2753440 2754043 0 0 oncogene, protein-coding 532 hg38 Updated: 2019-03-31 Owner: ChiTaRS	RPL17P34	6..524 96.0%	- 10	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	327..532 98.1%	- 7	1 0 0	exon-intron
10 Homo Sapiens	BF675674 ANNOTATION OF CHIMERA FUSION GenBank ID: BF675674 FASTA Head Gene (1) Alignment: MRC2 | OMIM: 612264 Tail Gene (2) Alignment: GNA12 | OMIM: 604394 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9902 17 - 62669114 62669373 6 0 protein-coding 2768 7 - 2780961 2781343 3 0 oncogene, protein-coding 685 hg38 Updated: 2019-02-20 Owner: ChiTaRS	MRC2 E7EME3 J3KRF1 J3QQZ6 Q9UBG0 NM_006039.4	1..258 100.0%	- 17	GNA12 C9J2Y7 E9PC54 Q03113 NM_001282441.1	243..626 95.6%	- 7	1 0 0	intron-intron

T O P