Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'GHITM'

Total of fusion sequences: 17 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_017018682.1
111..138
96.5%
-
12

NM_014394.2
139..543
100.0%
+
10
1
0
0
intron-exon
2
Homo Sapiens
ChimerDB
ENST00000341942
1..330
100.0%
-
7

NM_014394.2
322..441
99.2%
-
10
1
0
0
intron-exon
3
Homo Sapiens
ChimerDB SNHG1
NR_152584.1
1..63
100.0%
-
11

NM_014394.2
64..580
100.0%
+
10
1
0
0
exon-exon
4
Homo Sapiens
1..223
100.0%
-
10
220..310
99.0%
-
10
0
65535
65535
exon-exon
5
Homo Sapiens

NM_014394.2
9..251
98.8%
-
10

NM_014394.2
248..269
100.0%
+
10
0
65535
65535
exon-exon
6
Homo Sapiens

NM_014394.2
3..97
96.7%
+
10

XR_002959558.1
75..101
96.3%
+
3
1
0
0
exon-intron
7
Homo Sapiens

NM_001199729.2
13..44
96.9%
+
8

NM_014394.2
40..526
96.5%
-
10
1
0
0
intron-exon
8
Homo Sapiens

NM_001032283.2
3..28
100.0%
+
12

NM_014394.2
16..485
100.0%
+
10
1
0
0
intron-exon
9
Homo Sapiens

NM_014394.2
25..123
99.0%
+
10

NM_002458.2
124..338
99.6%
-
11
1
0
0
exon-exon
10
Homo Sapiens

NM_020376.3
12..262
98.4%
-
11

NM_014394.2
255..361
99.1%
+
10
1
0
0
exon-exon

T o p