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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'GFRA1'

Total of fusion sequences: 7 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation, PPI
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed, iHOP
reference
Name(s)1 Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2 Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,151617
Homo Sapiens ChimerDB 7..331
100.0%
+
10
328..424
100.0%
+
16
1
0
0
Homo Sapiens 1..22
95.5%
-
10
20..664
97.5%
-
5
1
0
0
Homo Sapiens LOC107984273 1..79
98.9%
-
10
80..786
98.9%
-
10
1
0
0
Homo Sapiens 1..20
100.0%
-
10
PPP1R12C 17..479
99.8%
-
19
1
0
0
Homo Sapiens 1..32
100.0%
-
10
20..270
99.3%
+
17
1
0
0
Homo Sapiens 1..28
100.0%
-
10
11..258
100.0%
-
10
1
0
0
Homo Sapiens 1..115
99.2%
+
10
105..337
99.2%
-
1
1
0
0