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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'GCH1'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_001024024.1
1..2907
100.0%
-
14
SLC7A11-AS1
NR_038380.1
2895..2917
100.0%
+
4
1
0
0
exon-intron
Homo Sapiens 1..359
100.0%
-
14
LOC102724465 343..365
100.0%
-
15
1
0
0
intron-intron
Homo Sapiens
NM_001024070.1
1..403
98.3%
-
14

NM_001278387.1
397..416
100.0%
-
12
1
0
0
exon-exon
Homo Sapiens
NM_001142463.2
24..140
100.0%
-
X

NM_001024070.1
134..294
98.2%
-
14
1
0
0
exon-intron
Homo Sapiens
XM_017018978.1
13..32
100.0%
+
12

NM_001024024.1
20..608
97.5%
-
14
1
0
0
exon-intron
Homo Sapiens
XM_005264317.3
1..28
100.0%
-
2

NM_001024024.1
27..536
99.5%
+
14
1
0
0
intron-exon
Homo Sapiens
NM_001024070.1
1..93
99.0%
-
14

XM_017011612.1
77..102
100.0%
+
6
1
0
0
exon-intron
Homo Sapiens
NM_001024024.1
1..24
100.0%
-
14

XR_002957532.1
23..587
99.7%
+
14
1
0
0
intron-exon
Homo Sapiens SLC10A5
Q5PT55

NM_001010893.2
12..36
96.0%
+
8

NM_001024070.1
20..43
100.0%
+
14
1
0
0
exon-intron

T o p