Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'GALNT18'

Total of fusion sequences: 6 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_011520071.3
13..416
99.1%
+
11

XM_024451838.1
24..446
100.0%
+
20
2
18
101
exon-exon
2
Homo Sapiens

XM_011520068.2
1..1623
99.9%
-
11
ND4
1617..2361
100.0%
+
MT
1
0
0
intron-exon
3
Homo Sapiens

NM_198516.2
1..262
98.0%
+
11

XM_005247916.3
243..591
100.0%
+
3
1
0
0
exon-intron
4
Homo Sapiens
55..76
95.5%
-
8
57..81
100.0%
+
11
1
0
0
intron-intron
5
Homo Sapiens

XR_001737080.1
11..33
100.0%
+
1

XM_011520068.2
31..101
97.2%
-
11
1
0
0
intron-intron
6
Homo Sapiens

XM_017014560.2
12..558
99.3%
+
9

NM_198516.2
542..567
96.2%
-
11
1
0
0
exon-intron

T O P