Result for the search of Gene Name/NCBI ID(s): 'Fermt3'

Total of fusion sequences: 24 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Mus musculus	BC092284 ANNOTATION OF CHIMERA FUSION GenBank ID: BC092284 FASTA UniProtKB: Q569W0 H2-D1 protein (Fragment) Fusion Gene(s): H2-D1 H2-Q2 Head Gene (1) Alignment: H2-D1 Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 14964 17 + 35263489 35267356 7 1 108101 19 + 6865792 7008329 9 0 1405 mm10 Updated: 2019-06-15 Owner: ChiTaRS	H2-D1 A0A218PH06 A0A2Z4SX56 A0A2Z4SX65 A0A2Z4SX67 A0A2Z4SX74 A0A2Z4SX77 A0A2Z4SX83 A0A2Z4SX87 A0A2Z4SX92 A0A2Z4SX96 A0A2Z4SXA2 A0A2Z4SXA5 A0A2Z4SXB3 A0A2Z4SXB6 A0A2Z4SXC0 A0A2Z4SXC3 A0A2Z4SXC7 A0A2Z4SXD0 A0A2Z4SXD4 A0A2Z4SXE1 A0A2Z4SXE3 A0A2Z4SXF0 A0A2Z4SXF9 A0A2Z4SXG7 A0A2Z4SXG8 A0A2Z4SXH6 A0A2Z4SXH8 A0A2Z4SXI5 A0A2Z4SXI6 A0A2Z4SXJ9 A0A2Z4SXK7 A0A2Z4SXL8 A0A2Z4SXM8 A0A2Z4SXN9 A0A2Z4SXP9 A0A2Z4SY74 A0A2Z4SY86 A0A2Z4SY98 A0A2Z4SYA7 A0A2Z4SYB8 A0A2Z4SYC9 A0A2Z4SYE0 A0A2Z4SYE8 A0A2Z4SYF9 A0A2Z4SYR2 A0A2Z4SYS1 A0A2Z4SYT1 A0A2Z4SYU1 A0A2Z4SYV0 A0A2Z4SYV3 A0A2Z4SYW2 A0A2Z4SYW5 A0A2Z4SYX4 A0A2Z4SYX7 A0A2Z4SYY5 A0A2Z4SYY7 A0A2Z4SYZ5 A0A2Z4SYZ7 A0A2Z4SZ02 A0A2Z4SZ12 A0A2Z4SZ22 A0A2Z4SZ33 A0A2Z4T1B9 A0A2Z4T1D0 A0A2Z4T1D9 A0A2Z4T1F2 A0A2Z4T1G2 A0A2Z4T1H0 A0A2Z4T1I1 A0A2Z4T1J0 A0A2Z4T1K1 A0A2Z4T2D0 A0A2Z4T2D9 A0A2Z4T2F0 A0A2Z4T2F8 A0A2Z4T2G8 A0A2Z4T2H6 A0A2Z4T2I9 A0A2Z4T2J9 A0A2Z4T2K9 A0A2Z4T3C6 A0A2Z4T3D8 A0A2Z4T3E7 A0A2Z4T3F8 A0A2Z4T3M8 A0A2Z4T3N6 A0A2Z4T3P6 A0A2Z4T3Q6 A0A2Z4T3R6 A0A482D1Q0 G3UX20 G3UZP7 K7W4D1 O19467 O19473 O19476 O78206 O78207 P01895 P01899 P01900 P14426 P14427 P97758 Q31116 Q31149 Q31154 Q31167 Q31168 Q31169 Q31210 Q3KQJ3 Q569W0 Q61891 Q61892 Q61893 Q62321 Q6RJ38 Q792Z7 Q8R3Y0 Q95457 Q9QWF4 W5XQG0 NM_010380.3	1..1392 98.1%	+ 17	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	1201..1405 96.5%	+ 19	3 0 320	exon-intron
2 Mus musculus	BC106173 ANNOTATION OF CHIMERA FUSION GenBank ID: BC106173 FASTA UniProtKB: Q3KQJ3 H2-D1 protein (Fragment) Fusion Gene(s): H2-D1 H2-Q2 Head Gene (1) Alignment: H2-D1 Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 14964 17 + 35263169 35267356 8 1 108101 19 + 6865792 7008329 9 0 1533 mm10 Updated: 2019-06-15 Owner: ChiTaRS	H2-D1 A0A218PH06 A0A2Z4SX56 A0A2Z4SX65 A0A2Z4SX67 A0A2Z4SX74 A0A2Z4SX77 A0A2Z4SX83 A0A2Z4SX87 A0A2Z4SX92 A0A2Z4SX96 A0A2Z4SXA2 A0A2Z4SXA5 A0A2Z4SXB3 A0A2Z4SXB6 A0A2Z4SXC0 A0A2Z4SXC3 A0A2Z4SXC7 A0A2Z4SXD0 A0A2Z4SXD4 A0A2Z4SXE1 A0A2Z4SXE3 A0A2Z4SXF0 A0A2Z4SXF9 A0A2Z4SXG7 A0A2Z4SXG8 A0A2Z4SXH6 A0A2Z4SXH8 A0A2Z4SXI5 A0A2Z4SXI6 A0A2Z4SXJ9 A0A2Z4SXK7 A0A2Z4SXL8 A0A2Z4SXM8 A0A2Z4SXN9 A0A2Z4SXP9 A0A2Z4SY74 A0A2Z4SY86 A0A2Z4SY98 A0A2Z4SYA7 A0A2Z4SYB8 A0A2Z4SYC9 A0A2Z4SYE0 A0A2Z4SYE8 A0A2Z4SYF9 A0A2Z4SYR2 A0A2Z4SYS1 A0A2Z4SYT1 A0A2Z4SYU1 A0A2Z4SYV0 A0A2Z4SYV3 A0A2Z4SYW2 A0A2Z4SYW5 A0A2Z4SYX4 A0A2Z4SYX7 A0A2Z4SYY5 A0A2Z4SYY7 A0A2Z4SYZ5 A0A2Z4SYZ7 A0A2Z4SZ02 A0A2Z4SZ12 A0A2Z4SZ22 A0A2Z4SZ33 A0A2Z4T1B9 A0A2Z4T1D0 A0A2Z4T1D9 A0A2Z4T1F2 A0A2Z4T1G2 A0A2Z4T1H0 A0A2Z4T1I1 A0A2Z4T1J0 A0A2Z4T1K1 A0A2Z4T2D0 A0A2Z4T2D9 A0A2Z4T2F0 A0A2Z4T2F8 A0A2Z4T2G8 A0A2Z4T2H6 A0A2Z4T2I9 A0A2Z4T2J9 A0A2Z4T2K9 A0A2Z4T3C6 A0A2Z4T3D8 A0A2Z4T3E7 A0A2Z4T3F8 A0A2Z4T3M8 A0A2Z4T3N6 A0A2Z4T3P6 A0A2Z4T3Q6 A0A2Z4T3R6 A0A482D1Q0 G3UX20 G3UZP7 K7W4D1 O19467 O19473 O19476 O78206 O78207 P01895 P01899 P01900 P14426 P14427 P97758 Q31116 Q31149 Q31154 Q31167 Q31168 Q31169 Q31210 Q3KQJ3 Q569W0 Q61891 Q61892 Q61893 Q62321 Q6RJ38 Q792Z7 Q8R3Y0 Q95457 Q9QWF4 W5XQG0 NM_010380.3	1..1520 98.2%	+ 17	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	1329..1533 96.5%	+ 19	3 0 320	exon-intron
3 Mus musculus	CK021395 ANNOTATION OF CHIMERA FUSION GenBank ID: CK021395 FASTA Head Gene (1) Alignment: Fermt3 Tail Gene (2) Alignment: H2-D1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 108101 19 - 6865792 7008335 9 0 14964 17 - 35266009 35267356 5 2 942 mm10 Updated: 2019-06-12 Owner: ChiTaRS	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	25..235 95.2%	- 19	H2-D1 A0A218PH06 A0A2Z4SX56 A0A2Z4SX65 A0A2Z4SX67 A0A2Z4SX74 A0A2Z4SX77 A0A2Z4SX83 A0A2Z4SX87 A0A2Z4SX92 A0A2Z4SX96 A0A2Z4SXA2 A0A2Z4SXA5 A0A2Z4SXB3 A0A2Z4SXB6 A0A2Z4SXC0 A0A2Z4SXC3 A0A2Z4SXC7 A0A2Z4SXD0 A0A2Z4SXD4 A0A2Z4SXE1 A0A2Z4SXE3 A0A2Z4SXF0 A0A2Z4SXF9 A0A2Z4SXG7 A0A2Z4SXG8 A0A2Z4SXH6 A0A2Z4SXH8 A0A2Z4SXI5 A0A2Z4SXI6 A0A2Z4SXJ9 A0A2Z4SXK7 A0A2Z4SXL8 A0A2Z4SXM8 A0A2Z4SXN9 A0A2Z4SXP9 A0A2Z4SY74 A0A2Z4SY86 A0A2Z4SY98 A0A2Z4SYA7 A0A2Z4SYB8 A0A2Z4SYC9 A0A2Z4SYE0 A0A2Z4SYE8 A0A2Z4SYF9 A0A2Z4SYR2 A0A2Z4SYS1 A0A2Z4SYT1 A0A2Z4SYU1 A0A2Z4SYV0 A0A2Z4SYV3 A0A2Z4SYW2 A0A2Z4SYW5 A0A2Z4SYX4 A0A2Z4SYX7 A0A2Z4SYY5 A0A2Z4SYY7 A0A2Z4SYZ5 A0A2Z4SYZ7 A0A2Z4SZ02 A0A2Z4SZ12 A0A2Z4SZ22 A0A2Z4SZ33 A0A2Z4T1B9 A0A2Z4T1D0 A0A2Z4T1D9 A0A2Z4T1F2 A0A2Z4T1G2 A0A2Z4T1H0 A0A2Z4T1I1 A0A2Z4T1J0 A0A2Z4T1K1 A0A2Z4T2D0 A0A2Z4T2D9 A0A2Z4T2F0 A0A2Z4T2F8 A0A2Z4T2G8 A0A2Z4T2H6 A0A2Z4T2I9 A0A2Z4T2J9 A0A2Z4T2K9 A0A2Z4T3C6 A0A2Z4T3D8 A0A2Z4T3E7 A0A2Z4T3F8 A0A2Z4T3M8 A0A2Z4T3N6 A0A2Z4T3P6 A0A2Z4T3Q6 A0A2Z4T3R6 A0A482D1Q0 G3UX20 G3UZP7 K7W4D1 O19467 O19473 O19476 O78206 O78207 P01895 P01899 P01900 P14426 P14427 P97758 Q31116 Q31149 Q31154 Q31167 Q31168 Q31169 Q31210 Q3KQJ3 Q569W0 Q61891 Q61892 Q61893 Q62321 Q6RJ38 Q792Z7 Q8R3Y0 Q95457 Q9QWF4 W5XQG0 NM_010380.3	44..772 99.1%	- 17	3 8 25	intron-exon
4 Mus musculus	CF585871 ANNOTATION OF CHIMERA FUSION GenBank ID: CF585871 FASTA Head Gene (1) Alignment: Fermt3 Tail Gene (2) Alignment: H2-D1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 108101 19 - 6865792 7008327 9 0 14964 17 - 35265984 35267356 5 1 916 mm10 Updated: 2019-06-12 Owner: ChiTaRS	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	1..207 96.1%	- 19	H2-D1 A0A218PH06 A0A2Z4SX56 A0A2Z4SX65 A0A2Z4SX67 A0A2Z4SX74 A0A2Z4SX77 A0A2Z4SX83 A0A2Z4SX87 A0A2Z4SX92 A0A2Z4SX96 A0A2Z4SXA2 A0A2Z4SXA5 A0A2Z4SXB3 A0A2Z4SXB6 A0A2Z4SXC0 A0A2Z4SXC3 A0A2Z4SXC7 A0A2Z4SXD0 A0A2Z4SXD4 A0A2Z4SXE1 A0A2Z4SXE3 A0A2Z4SXF0 A0A2Z4SXF9 A0A2Z4SXG7 A0A2Z4SXG8 A0A2Z4SXH6 A0A2Z4SXH8 A0A2Z4SXI5 A0A2Z4SXI6 A0A2Z4SXJ9 A0A2Z4SXK7 A0A2Z4SXL8 A0A2Z4SXM8 A0A2Z4SXN9 A0A2Z4SXP9 A0A2Z4SY74 A0A2Z4SY86 A0A2Z4SY98 A0A2Z4SYA7 A0A2Z4SYB8 A0A2Z4SYC9 A0A2Z4SYE0 A0A2Z4SYE8 A0A2Z4SYF9 A0A2Z4SYR2 A0A2Z4SYS1 A0A2Z4SYT1 A0A2Z4SYU1 A0A2Z4SYV0 A0A2Z4SYV3 A0A2Z4SYW2 A0A2Z4SYW5 A0A2Z4SYX4 A0A2Z4SYX7 A0A2Z4SYY5 A0A2Z4SYY7 A0A2Z4SYZ5 A0A2Z4SYZ7 A0A2Z4SZ02 A0A2Z4SZ12 A0A2Z4SZ22 A0A2Z4SZ33 A0A2Z4T1B9 A0A2Z4T1D0 A0A2Z4T1D9 A0A2Z4T1F2 A0A2Z4T1G2 A0A2Z4T1H0 A0A2Z4T1I1 A0A2Z4T1J0 A0A2Z4T1K1 A0A2Z4T2D0 A0A2Z4T2D9 A0A2Z4T2F0 A0A2Z4T2F8 A0A2Z4T2G8 A0A2Z4T2H6 A0A2Z4T2I9 A0A2Z4T2J9 A0A2Z4T2K9 A0A2Z4T3C6 A0A2Z4T3D8 A0A2Z4T3E7 A0A2Z4T3F8 A0A2Z4T3M8 A0A2Z4T3N6 A0A2Z4T3P6 A0A2Z4T3Q6 A0A2Z4T3R6 A0A482D1Q0 G3UX20 G3UZP7 K7W4D1 O19467 O19473 O19476 O78206 O78207 P01895 P01899 P01900 P14426 P14427 P97758 Q31116 Q31149 Q31154 Q31167 Q31168 Q31169 Q31210 Q3KQJ3 Q569W0 Q61891 Q61892 Q61893 Q62321 Q6RJ38 Q792Z7 Q8R3Y0 Q95457 Q9QWF4 W5XQG0 NM_010380.3	16..784 97.9%	- 17	3 8 25	intron-exon
5 Mus musculus	BI689108 ANNOTATION OF CHIMERA FUSION GenBank ID: BI689108 FASTA Head Gene (1) Alignment: Rad18 Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 58186 6 - 112643073 112643219 0 0 protein-coding 108101 19 - 7015372 7015404 0 0 163 mm10 Updated: 2019-06-05 Owner: ChiTaRS	Rad18 D3Z733 D3Z734 E9Q392 F6ZKR0 Q8CDH2 Q8CED3 Q921R6 Q9QXK2 W4VSP9 XM_006506434.3	1..145 100.0%	- 6	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	137..163 100.0%	- 19	1 0 0	intron-intron
6 Mus musculus	BI687700 ANNOTATION OF CHIMERA FUSION GenBank ID: BI687700 FASTA Head Gene (1) Alignment: Rad18 Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 58186 6 - 112643073 112643219 0 0 protein-coding 108101 19 - 7015372 7015404 0 0 161 mm10 Updated: 2019-06-05 Owner: ChiTaRS	Rad18 D3Z733 D3Z734 E9Q392 F6ZKR0 Q8CDH2 Q8CED3 Q921R6 Q9QXK2 W4VSP9 XM_006506434.3	1..143 98.0%	- 6	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	135..161 100.0%	- 19	1 0 0	intron-intron
7 Mus musculus	CK128155 ANNOTATION OF CHIMERA FUSION GenBank ID: CK128155 FASTA Head Gene (1) Alignment: Anxa7 Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 11750 14 - 20455282 20456047 1 1 108101 19 - 7015372 7015397 0 0 783 mm10 Updated: 2019-06-11 Owner: ChiTaRS	Anxa7 A0A286YCS5 A0A286YCW4 A0A2C9F2D2 Q07076 Q3TJ49 Q3UYL7 Q8BP75 Q8CCV9 Q922A2 XM_006518453.3	1..759 99.8%	- 14	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	756..781 100.0%	- 19	1 0 0	exon-intron
8 Mus musculus	BE448844 ANNOTATION OF CHIMERA FUSION GenBank ID: BE448844 FASTA Head Gene (1) Alignment: 2310001H17Rik Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 76432 6 - 129232788 129237845 3 1 108101 19 - 7015233 7015394 0 0 388 mm10 Updated: 2019-06-15 Owner: ChiTaRS	2310001H17Rik NR_040268.1	9..365 100.0%	- 6	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	361..388 100.0%	- 19	1 0 0	exon-intron
9 Mus musculus	CF582456 ANNOTATION OF CHIMERA FUSION GenBank ID: CF582456 FASTA Head Gene (1) Alignment: Fermt3 Tail Gene (2) Alignment: Cela2a Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 108101 19 + 7015372 7015394 0 0 13706 4 + 141814962 141819202 3 1 protein-coding 500 mm10 Updated: 2019-06-12 Owner: ChiTaRS	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	1..23 100.0%	+ 19	Cela2a P05208 Q3UP87 NM_007919.2	21..488 100.0%	+ 4	1 0 0	intron-exon
10 Mus musculus	DV056127 ANNOTATION OF CHIMERA FUSION GenBank ID: DV056127 FASTA Head Gene (1) Alignment: Ube2k Tail Gene (2) Alignment: Fermt3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 53323 5 + 65594418 65595145 2 1 protein-coding 108101 19 - 7015197 7015224 0 0 1030 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Ube2k A0A0J9YU07 A0A0J9YUI1 A0A0J9YUR9 D3Z4U3 F8WIC2 P61087 Q3TL77 Q3V3R8 Q6ZWQ6 NM_016786.4	56..457 99.6%	+ 5	Fermt3 A0A494B9F7 A0A494B9W3 A0A494BBJ8 Q3TEE6 Q6NXZ9 Q8K1B8 XM_006526593.3	452..479 96.5%	- 19	1 0 0	exon-intron

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