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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'FXR1'

Total of fusion sequences: 12 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_017007299.1
1..408
99.8%
+
3

XM_017006661.1
404..562
100.0%
+
3
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_145055.3
1..217
100.0%
+
18

XM_017007299.1
215..434
99.1%
+
3
1
0
0
exon-exon
3
Homo Sapiens
1..25
96.0%
-
3
11..34
95.9%
-
6
1
0
0
intron-intron
4
Homo Sapiens
1..22
95.5%
-
2
2..404
96.8%
+
3
1
0
0
intron-intron
5
Homo Sapiens

XM_017007299.1
2..194
99.0%
+
3
REPS2
Q8NFH8

XM_011545603.2
188..224
100.0%
+
X
1
0
0
exon-intron
6
Homo Sapiens

NM_001313992.1
15..83
100.0%
-
2

XM_017007299.1
72..504
99.8%
-
3
1
0
0
exon-exon
7
Homo Sapiens

XM_017007299.1
1..225
100.0%
+
3

NM_002467.5
224..263
100.0%
+
8
1
0
0
exon-exon
8
Homo Sapiens

XM_017007299.1
1..98
100.0%
+
3
LOC100132797 72..115
97.8%
-
12
1
0
0
exon-exon
9
Homo Sapiens

NM_001324288.1
51..84
100.0%
-
10

XM_017007299.1
81..173
100.0%
-
3
1
0
0
intron-intron
10
Homo Sapiens

XM_017007299.1
2..383
99.8%
+
3

NR_145413.2
378..402
100.0%
+
7
1
0
0
exon-intron

T o p