Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'FOXP1'

Total of fusion sequences: 20 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
XM_006505314.3
1..508
100.0%
-
6

XM_006505314.3
504..1956
100.0%
-
6
0
17093
63659
exon-exon
2
Mus musculus

XM_006505314.3
483..722
99.9%
-
6

XM_017321518.1
707..2898
100.0%
+
6
1
0
0
exon-exon
3
Mus musculus

NM_001160319.1
1..2692
100.0%
+
4

XM_006505314.3
2681..2734
100.0%
+
6
1
0
0
exon-intron
4
Mus musculus

XM_006505319.1
1..719
95.0%
+
6

NM_175006.2
291..2403
100.0%
-
13
1
0
0
intron-exon
5
Mus musculus

XM_006505314.3
2..314
99.7%
-
6

XM_006505314.3
307..534
100.0%
-
6
0
50252
47318
intron-intron
6
Mus musculus

XM_006505314.3
1..410
100.0%
-
6

XM_017321305.1
161..659
98.3%
-
6
0
50252
47318
intron-intron
7
Mus musculus

XM_006505314.3
20..308
98.3%
-
6

XM_006505314.3
303..764
99.2%
-
6
0
17093
63659
intron-intron
8
Mus musculus

XM_006505816.3
326..587
96.0%
-
6

XM_006505314.3
381..594
100.0%
+
6
1
0
0
intron-intron
9
Mus musculus

NM_017471.2
20..824
98.2%
-
X

XM_006505314.3
824..847
100.0%
-
6
1
0
0
intron-exon
10
Mus musculus

XM_017318433.1
1..631
100.0%
-
X

XM_006505314.3
625..646
100.0%
+
6
1
0
0
exon-intron

T o p