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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'FOXP1'

Total of fusion sequences: 53 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_016734.2
1..828
100.0%
-
9

XM_011533585.3
825..3018
100.0%
-
3
0
31399
56709
exon-exonBREAKPOINTs
2
Homo Sapiens
SplGraphs
NM_001923.4
1..237
100.0%
-
11

XM_011533585.3
235..404
96.5%
-
3
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
NM_005345.5
22..245
96.9%
-
6

XM_011533585.3
241..485
98.0%
+
3
1
0
0
exon-exon
4
Mus musculus
SplGraphs
XM_006505314.3
1..508
100.0%
-
6

XM_006505314.3
504..1956
100.0%
-
6
0
17093
63659
exon-exon
5
Homo Sapiens

NM_016734.2
1..32
100.0%
-
9

XM_011533585.3
31..67
100.0%
-
3
0
31399
56709
exon-exonBREAKPOINTs
6
Mus musculus

XM_006505314.3
483..722
99.9%
-
6

XM_017321518.1
707..2898
100.0%
+
6
1
0
0
exon-exon
7
Homo Sapiens

XM_011533585.3
19..158
100.0%
+
3

XM_011533585.3
155..245
100.0%
+
3
0
65535
65535
exon-exon
8
Mus musculus

NM_001160319.1
1..2692
100.0%
+
4

XM_006505314.3
2681..2734
100.0%
+
6
1
0
0
exon-intron
9
Mus musculus

XM_006505319.1
1..719
95.0%
+
6

NM_175006.2
291..2403
100.0%
-
13
1
0
0
intron-exon
10
Homo Sapiens

XM_006713103.2
1..132
97.8%
+
3

XM_011533585.3
131..266
98.6%
-
3
0
65535
65535
intron-intron

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