Result for the search of Gene Name/NCBI ID(s): 'FHL1'

Total of fusion sequences: 8 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs DA822142 ANNOTATION OF CHIMERA FUSION GenBank ID: DA822142 FASTA Head Gene (1) Alignment: PHB2 | OMIM: 610704 Tail Gene (2) Alignment: FHL1 | OMIM: 300163 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 11331 12 - 6970576 6970728 10 1 protein-coding 2273 X + 136207933 136210066 4 1 tumor suppressor 567 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LIM (PF00412, IPR001781, SM00132) 58 55 109 3.1e-16 45.700 LIM domain DUF4428 (PF14471, IPR027872) 51 150 192 0.00035 6.800 Domain of unknown function (DUF4428) Updated: 2019-02-21 Owner: ChiTaRS	PHB2 A0A3G2KQ93 F5GWA7 F5GY37 F5H0C5 F5H2D2 F5H3X6 J3KPX7 Q99623 U3KPZ5 NM_001144831.1	3..156 98.1%	- 12	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	156..567 100.0%	+ X	1 0 0	exon-exon
2 Homo Sapiens	BF825718 ANNOTATION OF CHIMERA FUSION GenBank ID: BF825718 FASTA Head Gene (1) Alignment: FHL1 | OMIM: 300163 Tail Gene (2) Alignment: COX6C | OMIM: 124090 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2273 X - 136210780 136210978 8 1 tumor suppressor 1345 8 - 99887496 99893686 3 1 oncogene 504 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LIM (PF00412, IPR001781, SM00132) 58 239 272 0.0002 7.900 LIM domain zf-MYND (PF01753, IPR002893) 38 422 466 0.0024 4.300 MYND finger COX6C (PF02937, IPR004204) 70 927 996 1.7e-38 117.000 Cytochrome c oxidase subunit VIc Updated: 2019-02-20 Owner: ChiTaRS	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	1..198 97.5%	- X	COX6C A0A024R9B7 P09669 NM_004374.3	182..497 99.1%	- 8	1 0 0	exon-exon
3 Homo Sapiens	BF827394 ANNOTATION OF CHIMERA FUSION GenBank ID: BF827394 FASTA Head Gene (1) Alignment: FHL1 | OMIM: 300163 Tail Gene (2) Alignment: COX6C | OMIM: 124090 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2273 X - 136210780 136210982 8 1 tumor suppressor 1345 8 - 99887493 99893686 3 1 oncogene 510 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LIM (PF00412, IPR001781, SM00132) 58 239 272 0.0002 7.900 LIM domain zf-MYND (PF01753, IPR002893) 38 422 466 0.0024 4.300 MYND finger Updated: 2019-02-20 Owner: ChiTaRS	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	6..208 97.6%	- X	COX6C A0A024R9B7 P09669 NM_004374.3	192..510 98.8%	- 8	1 0 0	exon-exon
4 Homo Sapiens	EC574788 ANNOTATION OF CHIMERA FUSION GenBank ID: EC574788 FASTA Head Gene (1) Alignment: FHL1 | OMIM: 300163 Tail Gene (2) Alignment: RANBP3 | OMIM: 603327 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2273 X + 136198354 136198374 0 0 tumor suppressor 8498 19 + 5916145 5916250 1 1 oncogene, protein-coding 108 hg38 Updated: 2019-03-27 Owner: ChiTaRS	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452354.1	1..21 100.0%	+ X	RANBP3 B7Z7F3 D6W641 K7EID7 K7EIJ4 K7EJ17 K7EMH9 K7EMT3 K7EN31 K7ENB9 K7ENJ2 K7EPW1 K7EQB8 K7ERD4 K7ESQ0 O75761 Q9H6Z4 XM_006722928.1	5..108 97.0%	+ 19	1 0 0	intron-exon
5 Homo Sapiens	AJ710343 ANNOTATION OF CHIMERA FUSION GenBank ID: AJ710343 FASTA Head Gene (1) Alignment: FHL1 | OMIM: 300163 Tail Gene (2) Alignment: SGCA | OMIM: 600119 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2273 X - 136210948 136211352 8 1 tumor suppressor 6442 17 + 50175280 50175361 2 1 protein-coding 486 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LIM (PF00412, IPR001781, SM00132) 58 239 272 0.00023 7.700 LIM domain zf-MYND (PF01753, IPR002893) 38 422 466 0.0023 4.300 MYND finger Updated: 2019-02-20 Owner: ChiTaRS	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	1..406 99.3%	- X	SGCA A0A0S2Z4P8 A0A0S2Z4Q1 D6R9S3 D6RAA4 E9PCT8 H0Y8T1 H0YAB9 H7C5V0 L8EC52 Q16586 XR_002958056.1	405..486 98.8%	+ 17	1 0 0	exon-exon
6 Homo Sapiens	CA411570 ANNOTATION OF CHIMERA FUSION GenBank ID: CA411570 FASTA Head Gene (1) Alignment: CTSL | OMIM: 116880 Tail Gene (2) Alignment: FHL1 | OMIM: 300163 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1514 9 - 87731342 87731393 9 1 oncogene, protein-coding 2273 X - 136209176 136209251 2 0 tumor suppressor 138 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Inhibitor_I29 (PF08246, IPR013201, SM00848) 58 325 384 3.6e-15 42.500 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 (PF00112, IPR000668, SM00645) 219 410 628 9.1e-89 283.400 Papain family cysteine protease Updated: 2019-02-21 Owner: ChiTaRS	CTSL A0A024R276 A5PLM9 P07711 Q5T8F0 Q9HBQ7 XM_005251716.4	18..69 100.0%	- 9	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	63..138 97.4%	- X	1 0 0	exon-intron
7 Homo Sapiens	CB054375 ANNOTATION OF CHIMERA FUSION GenBank ID: CB054375 FASTA Head Gene (1) Alignment: LOC643542 Tail Gene (2) Alignment: FHL1 | OMIM: 300163 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 643542 18 - 67569437 67569467 1 0 ncRNA 2273 X - 136211231 136211354 1 1 tumor suppressor 158 hg38 Updated: 2019-01-09 Owner: ChiTaRS	LOC643542 NR_033921.1	12..39 100.0%	- 18	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	34..158 97.6%	- X	1 0 0	intron-exon
8 Homo Sapiens	BF092514 ANNOTATION OF CHIMERA FUSION GenBank ID: BF092514 FASTA Head Gene (1) Alignment: CXADR | OMIM: 602621 Tail Gene (2) Alignment: FHL1 | OMIM: 300163 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1525 21 + 17594048 17594251 6 1 protein-coding 2273 X - 136210350 136210522 1 1 tumor suppressor 366 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to BTG (PF07742, IPR002087, SM00099) 116 1 111 1.6e-43 133.500 BTG family Updated: 2019-02-20 Owner: ChiTaRS	CXADR P78310 XM_011529477.2	1..201 99.1%	+ 21	FHL1 A0A0D9SEY7 A0A0D9SFB0 A0A0D9SFI6 A0A0D9SFZ9 A0A0D9SG53 A0A0D9SGB2 A0A0D9SGC5 A0A0D9SGD1 A0A494C0D6 A0A494C0J3 A0A494C1G1 Q13642 Q5JXH7 Q5JXH8 Q5JXH9 Q5JXI0 Q5JXI2 Q5JXI3 Q5JXI8 XM_024452353.1	194..366 100.0%	- X	1 0 0	exon-exon

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