Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'FGF13'

Total of fusion sequences: 6 (from 12,196,033 parsed EST/mRNAs. Last update 2021-05-29)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB LOC100129620
NR_033940.1
1..302
99.4%
+
1

NM_001139501.1
302..579
99.7%
-
X
1
0
0
exon-exon
2
Homo Sapiens

XM_024452352.1
1..26
100.0%
+
X

NM_001349736.1
17..317
100.0%
+
5
1
0
0
intron-exon
3
Homo Sapiens

XM_024452352.1
1..26
100.0%
+
X

NM_001349736.1
17..238
99.6%
+
5
1
0
0
intron-exon
4
Homo Sapiens

NM_033642.2
1..3627
100.0%
-
X

XM_017012320.1
3628..3775
100.0%
+
7
1
0
0
intron-intron
5
Homo Sapiens

XM_024452352.1
1..146
99.4%
+
X

NM_006904.6
138..177
100.0%
-
8
1
0
0
intron-exon
6
Homo Sapiens

XM_005253167.2
4..273
98.8%
-
11

XM_024452352.1
240..341
96.9%
-
X
1
0
0
exon-intron

T O P