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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'FAM213A'

Total of fusion sequences: 10 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB FAM213A
Q9BRX8

XM_011540265.2
16..260
100.0%
+
10

NM_001415.3
255..327
98.7%
+
X
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
XM_011511646.3
1..1294
99.1%
-
2
FAM213A
Q9BRX8

XM_011540265.2
1294..2304
100.0%
+
10
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB FAM213A
Q9BRX8

XM_011540265.2
1..229
100.0%
-
10

NM_001165258.1
230..372
100.0%
-
6
1
0
0
exon-exon
4
Homo Sapiens

XM_011532987.2
1..293
99.7%
+
2
FAM213A
Q9BRX8

XM_011540265.2
288..458
100.0%
-
10
1
0
0
exon-exonHS439
5
Homo Sapiens

XM_011531160.3
1..1678
100.0%
+
X
FAM213A
Q9BRX8

XM_011540265.2
1666..1700
100.0%
-
10
1
0
0
exon-intron
6
Homo Sapiens
FAM213A
Q9BRX8

XM_011540265.2
1..233
98.3%
+
10
FAM213A
Q9BRX8

XM_011540265.2
228..303
100.0%
+
10
0
11981
17943
exon-exon
7
Homo Sapiens
FAM213A
Q9BRX8

XM_011540265.2
17..82
100.0%
+
10
FAM213A
Q9BRX8

XM_011540265.2
72..301
98.7%
+
10
0
11981
17943
intron-intron
8
Homo Sapiens
FZD5
Q13467

XM_024453130.1
15..533
98.5%
-
2
FAM213A
Q9BRX8

NM_001243781.1
518..546
96.3%
-
10
1
0
0
exon-intron
9
Homo Sapiens
FAM213A
Q9BRX8

XM_011540265.2
39..304
95.5%
-
10

XM_017028687.2
300..401
98.6%
-
22
1
0
0
exon-intron
10
Homo Sapiens
MT-TS1 1..304
100.0%
-
MT
FAM213A
Q9BRX8

XM_011540266.2
296..547
100.0%
+
10
1
0
0
intron-exon

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