Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Ef1alpha48D'

Total of fusion sequences: 35 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
D.MelanogasterSplGraphs
NM_001260296.1
1..1291
100.0%
+
3R

NM_058027.5
1292..2195
99.9%
+
2R
1
0
0
exon-exon
D.MelanogasterSplGraphs
NM_058027.5
1..165
100.0%
+
2R
scyl
Q9VTH4

NM_206321.2
155..461
99.7%
+
3L
2
3
0
exon-exon
D.MelanogasterSplGraphs
NM_058027.5
1..118
100.0%
+
2R

NM_176510.5
110..524
100.0%
+
3R
1
0
0
exon-exon
D.MelanogasterSplGraphs CG7214
Q9VLY1

NM_135297.3
1..64
100.0%
-
2L

NM_058027.5
59..439
100.0%
+
2R
1
0
0
exon-exon
D.MelanogasterSplGraphs
NM_058027.5
8..431
99.3%
+
2R
CG14355
Q9VFM5

NM_142083.4
424..567
98.7%
-
3R
1
0
0
exon-exon
D.MelanogasterSplGraphs
NM_058027.5
1..166
100.0%
+
2R

NM_001144725.3
150..510
99.2%
-
X
1
0
0
exon-intron
D.MelanogasterSplGraphs
NM_058027.5
1..182
98.4%
+
2R

NM_001275469.1
178..377
99.5%
-
3R
1
0
0
exon-exon
D.Melanogaster
NM_058027.5
109..223
100.0%
-
2R

NM_139755.3
224..1120
100.0%
+
3L
2
529
0
exon-exon
D.Melanogaster
NM_001015155.3
8..694
100.0%
-
3L

NM_058027.5
694..2716
100.0%
+
2R
1
0
0
intron-exon
D.Melanogaster
NM_058027.5
1..223
99.2%
+
2R

NM_058027.5
210..282
100.0%
-
2R
3
566
618
exon-exon

T o p