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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'EPHA1'

Total of fusion sequences: 10 (from 1931265 parsed EST/mRNAs. Last update 2020-01-25 17:30:30)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XR_428169.4
16..209
99.0%
-
7
PXN-AS1
NR_038924.1
205..432
100.0%
+
12
1
0
0
exon-intron
2
Homo Sapiens
ChimerDB
XR_428169.4
18..302
100.0%
-
7

NM_001202560.2
299..594
100.0%
-
7
1
0
0
exon-exon
3
Homo Sapiens

XR_428169.4
17..84
100.0%
-
7

NM_001010972.1
78..773
99.9%
+
7
0
7805
66
exon-exon
4
Homo Sapiens

XR_428169.4
1..128
98.5%
-
7

NM_003461.4
129..571
98.5%
-
7
0
7805
66
exon-exon
5
Homo Sapiens

NM_001040432.3
1..37
96.5%
+
3

XM_006715880.3
10..130
99.2%
-
7
2
0
62
intron-exon
6
Homo Sapiens

XR_428169.4
17..189
100.0%
-
7
NUDCD3
Q8IVD9

XM_017011910.1
187..597
100.0%
+
7
1
0
0
exon-intron
7
Homo Sapiens

ENST00000397885
1..22
100.0%
+
9

XM_006715880.3
16..159
95.2%
-
7
1
0
0
intron-exon
8
Homo Sapiens

XR_428169.4
15..81
100.0%
-
7
61..127
98.6%
+
14
1
0
0
exon-exon
9
Homo Sapiens

XR_428169.4
18..243
98.3%
-
7

XR_428169.4
239..433
99.5%
+
7
1
0
0
exon-exon
10
Homo Sapiens

XR_428169.4
12..696
99.5%
-
7

NM_014010.4
691..712
95.5%
+
9
1
0
0
exon-intron

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