Result for the search of Gene Name/NCBI ID(s): 'ELK3'

Total of fusion sequences: 6 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	DD229597 ANNOTATION OF CHIMERA FUSION GenBank ID: DD229597 FASTA Head Gene (1) Alignment: ELK3 | OMIM: 600247 Tail Gene (2) Alignment: GRK6 | OMIM: 600869 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2004 12 - 96269547 96269824 6 1 oncogene, protein-coding 2870 5 - 177431994 177432726 14 1 protein-coding 496 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ets (PF00178, IPR000418, SM00413) 81 114 193 2.4e-37 113.600 Ets-domain RGS (PF00615, IPR000342, SM00315) 118 1565 1683 1.8e-21 62.900 Regulator of G protein signaling domain Pkinase (PF00069, IPR000719) 264 1699 1961 6e-72 228.200 Protein kinase domain Updated: 2019-01-29 Owner: ChiTaRS	ELK3 A0A024RBE2 F8VUJ0 F8VZQ0 G3V1Z7 H0YIH6 P41970 XM_006719275.3	6..283 100.0%	- 12	GRK6 D6R9V4 D6RC88 D6RDA3 D6RHC7 D6RHX8 F8W9W2 H0Y967 P43250 Q96AD6 XM_006714858.3	284..496 100.0%	- 5	1 0 0	exon-exon
2 Homo Sapiens	DI093600 ANNOTATION OF CHIMERA FUSION GenBank ID: DI093600 FASTA Head Gene (1) Alignment: ELK3 | OMIM: 600247 Tail Gene (2) Alignment: GRK6 | OMIM: 600869 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2004 12 - 96269547 96269824 6 1 oncogene, protein-coding 2870 5 - 177431994 177432726 14 1 protein-coding 496 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ets (PF00178, IPR000418, SM00413) 81 114 193 2.4e-37 113.600 Ets-domain RGS (PF00615, IPR000342, SM00315) 118 1565 1683 1.8e-21 62.900 Regulator of G protein signaling domain Pkinase (PF00069, IPR000719) 264 1699 1961 6e-72 228.200 Protein kinase domain Updated: 2019-01-29 Owner: ChiTaRS	ELK3 A0A024RBE2 F8VUJ0 F8VZQ0 G3V1Z7 H0YIH6 P41970 XM_006719275.3	6..283 100.0%	- 12	GRK6 D6R9V4 D6RC88 D6RDA3 D6RHC7 D6RHX8 F8W9W2 H0Y967 P43250 Q96AD6 XM_006714858.3	284..496 100.0%	- 5	1 0 0	exon-exon
3 Homo Sapiens	BI491184 ANNOTATION OF CHIMERA FUSION GenBank ID: BI491184 FASTA Head Gene (1) Alignment: CASC17 Tail Gene (2) Alignment: ELK3 | OMIM: 600247 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 101928165 17 - 71126905 71184695 2 0 ncRNA 2004 12 - 96269269 96269823 1 1 oncogene, protein-coding 580 hg38 Updated: 2019-02-17 Owner: ChiTaRS	CASC17 NR_104152.1	1..274 98.0%	- 17	ELK3 A0A024RBE2 F8VUJ0 F8VZQ0 G3V1Z7 H0YIH6 P41970 XM_006719275.3	19..573 100.0%	- 12	1 0 0	intron-exon
4 Homo Sapiens	CR745380 ANNOTATION OF CHIMERA FUSION GenBank ID: CR745380 FASTA Head Gene (1) Alignment: ELK3 | OMIM: 600247 Tail Gene (2) Alignment: BRINP1 | OMIM: 602865 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2004 12 + 96268572 96268842 6 1 oncogene, protein-coding 1620 9 - 119162067 119162286 8 0 tumor suppressor, protein-coding 485 hg38 Updated: 2019-01-31 Owner: ChiTaRS	ELK3 A0A024RBE2 F8VUJ0 F8VZQ0 G3V1Z7 H0YIH6 P41970 XM_006719275.3	1..271 100.0%	+ 12	BRINP1 O60477 ENST00000265922	266..485 100.0%	- 9	1 0 0	exon-intron
5 Homo Sapiens	DL058705 ANNOTATION OF CHIMERA FUSION GenBank ID: DL058705 FASTA Head Gene (1) Alignment: PSMD7 | OMIM: 157970 Tail Gene (2) Alignment: ELK3 | OMIM: 600247 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5713 16 + 74305614 74305782 1 1 protein-coding 2004 12 - 96209903 96210213 0 0 oncogene, protein-coding 222 hg38 Updated: 2019-03-03 Owner: ChiTaRS	PSMD7 H3BNT7 H3BQV2 H3BTM8 P51665 NM_002811.4	12..183 97.1%	+ 16	ELK3 A0A024RBE2 F8VUJ0 F8VZQ0 G3V1Z7 H0YIH6 P41970 XM_006719275.3	173..217 97.3%	- 12	1 0 0	exon-intron
6 Homo Sapiens	T24447 ANNOTATION OF CHIMERA FUSION GenBank ID: T24447 FASTA Head Gene (1) Alignment: ZNF681 Tail Gene (2) Alignment: ELK3 | OMIM: 600247 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 148213 19 + 23745448 23745470 1 0 protein-coding 2004 12 - 96269689 96269822 1 1 oncogene, protein-coding 176 hg38 Updated: 2019-02-01 Owner: ChiTaRS	ZNF681 B9EGB3 E9PJB6 E9PSC0 Q96N22 NM_138286.2	24..46 100.0%	+ 19	ELK3 A0A024RBE2 F8VUJ0 F8VZQ0 G3V1Z7 H0YIH6 P41970 XM_006719275.3	44..176 100.0%	- 12	1 0 0	intron-exon

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