Result for the search of Gene Name/NCBI ID(s): 'ECE1'

Total of fusion sequences: 12 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	ChimerDB BE336604 ANNOTATION OF CHIMERA FUSION GenBank ID: BE336604 FASTA Head Gene (1) Alignment: ZNF672 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 79894 1 + 248848954 248849030 4 1 protein-coding 1889 1 - 21217974 21218436 19 1 protein-coding 532 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to zf-C2H2 (PF00096, IPR007087, SM00355) 23 262 284 2.8e-07 17.200 Zinc finger, C2H2 type zf-H2C2_2 (PF13465, IPR007087) 26 304 329 3.6e-07 16.900 Zinc-finger double domain zf-C2HC_2 (PF13913) 25 376 396 2.6e-05 10.400 zinc-finger of a C2HC-type DUF1610 (PF07754, IPR011668) 24 818 825 0.05 0.000 Domain of unknown function (DUF1610) Updated: 2019-02-20 Owner: ChiTaRS	ZNF672 D6RD56 D6RH11 Q499Z4 XM_005270336.2	1..75 100.0%	+ 1	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	70..532 99.2%	- 1	1 0 0	exon-exon
2 Homo Sapiens	CV397322 ANNOTATION OF CHIMERA FUSION GenBank ID: CV397322 FASTA Head Gene (1) Alignment: ECE1 | OMIM: 600423 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1889 1 - 21228041 21228218 5 0 protein-coding 1889 1 + 21227961 21228018 15 1 protein-coding 243 hg38 Updated: 2019-02-21 Owner: ChiTaRS	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	14..191 100.0%	- 1	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	186..243 100.0%	+ 1	0 8238 8848	intron-exon	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - CV397322 ECE1 1 21228213 21228218 21223507 4706 ECE1 1 21227961 21227966 21223507 4454 KBM-7 (CVCL_A426) 25497547 CV397322 ECE1 1 21228213 21228218 21233507 5289 ECE1 1 21227961 21227966 21223507 4454 KBM-7 (CVCL_A426) 25497547
3 Homo Sapiens	AA864426 ANNOTATION OF CHIMERA FUSION GenBank ID: AA864426 FASTA Head Gene (1) Alignment: ECE1 | OMIM: 600423 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1889 1 + 21218604 21218969 1 1 protein-coding 1889 1 + 21217787 21217914 19 1 protein-coding 483 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Peptidase_M13_N (PF05649, IPR008753) 374 147 533 8.9e-130 419.800 Peptidase family M13 Peptidase_M13 (PF01431, IPR018497) 205 592 795 4.8e-78 247.600 Peptidase family M13 Updated: 2019-02-23 Owner: ChiTaRS	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	1..366 99.8%	+ 1	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	357..483 99.3%	+ 1	0 1866 589	exon-exon	3HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - AA864426 ECE1 1 21218960 21218969 21213507 5453 ECE1 1 21217787 21217796 21213507 4280 KBM-7 (CVCL_A426) 25497547 AA864426 ECE1 1 21218960 21218969 21223507 4538 ECE1 1 21217787 21217796 21213507 4280 KBM-7 (CVCL_A426) 25497547 AA864426 ECE1 1 21218960 21218969 21223507 4538 ECE1 1 21217787 21217796 21223507 5711 KBM-7 (CVCL_A426) 25497547
4 Homo Sapiens	AI343944 ANNOTATION OF CHIMERA FUSION GenBank ID: AI343944 FASTA Head Gene (1) Alignment: ECE1 | OMIM: 600423 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1889 1 - 21219193 21219589 1 1 protein-coding 1889 1 - 21219245 21219780 19 1 protein-coding 454 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Peptidase_M13_N (PF05649, IPR008753) 374 147 533 1.2e-129 419.300 Peptidase family M13 Peptidase_M13 (PF01431, IPR018497) 205 592 795 6.1e-78 247.200 Peptidase family M13 Updated: 2019-02-20 Owner: ChiTaRS	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	1..398 99.0%	- 1	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	399..454 100.0%	- 1	0 1866 589	exon-exon	3HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - AI343944 ECE1 1 21219588 21219589 21213507 6081 ECE1 1 21219245 21219246 21213507 5738 KBM-7 (CVCL_A426) 25497547 AI343944 ECE1 1 21219588 21219589 21223507 3918 ECE1 1 21219245 21219246 21213507 5738 KBM-7 (CVCL_A426) 25497547 AI343944 ECE1 1 21219588 21219589 21223507 3918 ECE1 1 21219245 21219246 21223507 4261 KBM-7 (CVCL_A426) 25497547
5 Homo Sapiens	BU929075 ANNOTATION OF CHIMERA FUSION GenBank ID: BU929075 FASTA Head Gene (1) Alignment: ANAPC16 | OMIM: 613427 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 119504 10 + 72216029 72220733 2 0 protein-coding 1889 1 - 20623448 21231116 19 0 protein-coding 353 hg38 Updated: 2019-01-09 Owner: ChiTaRS	ANAPC16 A0A087WUN5 C5H3H2 Q96DE5 NM_001242546.1	4..349 99.8%	+ 10	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	53..353 95.7%	- 1	1 0 0	intron-intron
6 Homo Sapiens	BQ336177 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ336177 FASTA Head Gene (1) Alignment: CFLAR | OMIM: 603599 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8837 2 + 201138016 201138157 5 1 oncogene, protein-coding 1889 1 + 21225324 21225442 17 1 protein-coding 264 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DED (PF01335, IPR001875, SM00031) 82 73 147 4e-14 39.000 Death effector domain Updated: 2019-02-21 Owner: ChiTaRS	CFLAR A0A024R3Y3 A0A024R3Z7 A0A0A0MR92 A0A336TY74 C9J408 C9J4Q0 C9JSU3 C9JV51 E9PAP3 F8WBH9 M0QY57 M0QYM0 M0R1A8 O15519 XR_001739017.2	12..148 99.3%	+ 2	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	144..262 100.0%	+ 1	1 0 0	exon-exon
7 Homo Sapiens	AW882114 ANNOTATION OF CHIMERA FUSION GenBank ID: AW882114 FASTA Head Gene (1) Alignment: ECE1 | OMIM: 600423 Tail Gene (2) Alignment: CES2 | OMIM: 605278 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1889 1 + 21218356 21223527 2 0 protein-coding 8824 16 - 66944695 66944838 1 1 protein-coding 330 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Peptidase_M13_N (PF05649, IPR008753) 374 147 533 8.3e-130 419.900 Peptidase family M13 Peptidase_M13 (PF01431, IPR018497) 205 592 795 4.5e-78 247.600 Peptidase family M13 Updated: 2019-02-20 Owner: ChiTaRS	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	15..318 98.3%	+ 1	CES2 H3BUN5 J3QLP1 J3QSC0 O00748 Q4G0E9 Q6IPK9 XM_017023818.2	187..330 100.0%	- 16	1 0 0	intron-exon
8 Homo Sapiens	R00228 ANNOTATION OF CHIMERA FUSION GenBank ID: R00228 FASTA Head Gene (1) Alignment: ECE1 | OMIM: 600423 Tail Gene (2) Alignment: PTPN23 | OMIM: 606584 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1889 1 + 21217282 21217385 1 1 protein-coding 25930 3 - 47412704 47412851 1 1 tumor suppressor, protein-coding 254 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Peptidase_M13_N (PF05649, IPR008753) 374 147 533 1.2e-129 419.400 Peptidase family M13 Peptidase_M13 (PF01431, IPR018497) 205 592 795 6.1e-78 247.200 Peptidase family M13 Updated: 2019-02-21 Owner: ChiTaRS	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	1..104 100.0%	+ 1	PTPN23 C9JD91 Q9H3S7 R4GMM7 NM_015466.3	100..248 98.0%	- 3	1 0 0	exon-exon
9 Homo Sapiens	BF932164 ANNOTATION OF CHIMERA FUSION GenBank ID: BF932164 FASTA Head Gene (1) Alignment: SELENOO | OMIM: 607917 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 83642 22 - 50216811 50217257 9 1 protein-coding 1889 1 + 21219910 21219967 19 1 protein-coding 342 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to UPF0061 (PF02696, IPR003846) 468 77 624 4e-126 407.500 Uncharacterized ACR, YdiU/UPF0061 family Updated: 2019-02-20 Owner: ChiTaRS	SELENOO A0A087X0Q9 Q9BVL4 NM_031454.1	12..287 99.3%	- 22	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	282..339 96.6%	+ 1	1 0 0	exon-exon
10 Homo Sapiens	BF964057 ANNOTATION OF CHIMERA FUSION GenBank ID: BF964057 FASTA Head Gene (1) Alignment: ARHGEF4 | OMIM: 605216 Tail Gene (2) Alignment: ECE1 | OMIM: 600423 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 50649 2 + 131046325 131046550 14 1 oncogene, protein-coding 1889 1 + 21217428 21217503 19 1 protein-coding 322 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to SH3_1 (PF00018, IPR001452, SM00326) 48 236 281 2.3e-14 39.100 SH3 domain RhoGEF (PF00621, IPR000219, SM00325) 181 324 502 4.7e-50 156.500 RhoGEF domain PH (PF00169, IPR001849, SM00233) 105 536 640 3.1e-12 33.300 PH domain Updated: 2019-02-20 Owner: ChiTaRS	ARHGEF4 A0A087X0P1 A0A0C4DFY6 A0A1B0GW00 A0A2X0SFW4 A4QPB6 E7EV07 E9PEM0 H0Y451 H0YCT6 Q53QF2 Q53TH6 Q9NR80 XM_005263681.2	10..235 98.3%	+ 2	ECE1 A0A024RAB0 A0A024RAB2 A0A024RAF7 A0A3B3ISF9 B4DKB2 E9PHZ1 E9PJG1 E9PN99 P42892 XM_006710398.2	229..304 100.0%	+ 1	1 0 0	exon-exon

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