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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ddx50'

Total of fusion sequences: 7 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_006507075.2
6..28
100.0%
-
6

XM_006514346.3
26..476
99.2%
-
10
1
0
0
intron-exon
2
Mus musculus

XM_006514346.3
1..480
99.8%
-
10
Gm8228 331..504
96.6%
-
9
1
0
0
intron-exon
3
Mus musculus

XM_006514346.3
52..584
99.5%
-
10
Gm30954
XR_001778738.1
585..616
100.0%
-
8
1
0
0
intron-intron
4
Mus musculus

XM_006514346.3
19..888
99.0%
-
10
Slc6a7
Q6PGE7

XM_006525930.2
865..898
100.0%
-
18
1
0
0
intron-intron
5
Mus musculus

XM_006514346.3
1..2468
100.0%
-
10
Gm6958
XM_001480210.3
2466..2498
100.0%
-
16
1
0
0
exon-exon
6
Mus musculus
Rn18s-rs5 11..477
100.0%
+
17

XM_006514346.3
471..682
100.0%
-
10
1
0
0
exon-exon
7
Mus musculus

ENSMUST00000130397
19..431
100.0%
+
14

XM_006514346.3
382..457
95.5%
+
10
1
0
0
exon-intron

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