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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ddx1'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_134040.1
1..680
99.6%
-
12
4921518K17Rik
NR_131110.1
679..707
100.0%
-
12
1
0
0
exon-intron
2
Mus musculus

NM_134040.1
21..546
99.7%
-
12

NM_001159604.1
545..577
100.0%
-
4
1
0
0
exon-intron
3
Mus musculus
A230004M16Rik
XR_388589.3
6..115
96.4%
+
11

NM_134040.1
51..558
100.0%
-
12
1
0
0
intron-exon
4
Mus musculus

NM_134040.1
1..108
100.0%
-
12
Dmrt1
Q9QZ59

NM_015826.5
106..129
100.0%
-
19
1
0
0
exon-intron
5
Mus musculus

NM_134040.1
22..679
99.7%
-
12
Sox2ot
ENSMUST00000197977
679..710
100.0%
+
3
1
0
0
exon-intron

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