Result for the search of Gene Name/NCBI ID(s): 'DPYSL2'

Total of fusion sequences: 29 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs BT006944 ANNOTATION OF CHIMERA FUSION GenBank ID: BT006944 FASTA UniProtKB: Q86U75 Dihydropyrimidinase-like 2 Head Gene (1) Alignment: DPYSL2 | OMIM: 602463 Tail Gene (2) Alignment: SDF2L1 | OMIM: 607551 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1808 8 + 26578255 26647707 11 1 protein-coding 23753 22 + 21642329 21644173 3 1 protein-coding 1860 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Amidohydro_1 (PF01979, IPR006680) 344 181 515 2.8e-39 121.400 Amidohydrolase family MIR (PF02815, IPR016093, SM00472) 186 558 703 6.9e-15 41.500 MIR domain Updated: 2019-02-21 Owner: ChiTaRS	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	1..1188 100.0%	+ 8	SDF2L1 Q9HCN8 NM_022044.2	1187..1858 100.0%	+ 22	2 126 258	exon-exon
2 Homo Sapiens	SplGraphs BP350453 ANNOTATION OF CHIMERA FUSION GenBank ID: BP350453 FASTA Head Gene (1) Alignment: DPYSL2 | OMIM: 602463 Tail Gene (2) Alignment: NFU1 | OMIM: 608100 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1808 8 + 26656491 26656761 14 1 protein-coding 27247 2 - 69400513 69415258 8 1 protein-coding 440 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Amidohydro_3 (PF07969, IPR013108) 473 262 312 0.00017 7.200 Amidohydrolase family Amidohydro_1 (PF01979, IPR006680) 344 270 659 3.2e-54 170.500 Amidohydrolase family Updated: 2019-02-23 Owner: ChiTaRS	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	1..271 100.0%	+ 8	NFU1 C9J8Q1 F8W9P7 F8WAV1 F8WET4 H7C537 Q9UMS0 XM_017003808.2	271..431 100.0%	- 2	1 0 0	exon-exon
3 Homo Sapiens	SplGraphs AK054747 ANNOTATION OF CHIMERA FUSION GenBank ID: AK054747 FASTA Head Gene (1) Alignment: RTN1 | OMIM: 600865 Tail Gene (2) Alignment: DPYSL2 | OMIM: 602463 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6252 14 - 59600436 59601090 1 0 protein-coding 1808 8 + 26656835 26658174 1 1 protein-coding 1988 hg38 Updated: 2019-02-20 Owner: ChiTaRS	RTN1 A8MT72 Q16799 Q2L7A7 Q2NKQ5 Q6IAX4 NM_021136.2	1..655 99.9%	- 14	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	649..1988 99.8%	+ 8	1 0 0	intron-exon
4 Homo Sapiens	SplGraphs BC010880 ANNOTATION OF CHIMERA FUSION GenBank ID: BC010880 FASTA Head Gene (1) Alignment: DPYSL2 | OMIM: 602463 Tail Gene (2) Alignment: SDF2L1 | OMIM: 607551 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1808 8 + 26577997 26647707 11 1 protein-coding 23753 22 + 21642329 21644299 3 1 protein-coding 2259 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Amidohydro_1 (PF01979, IPR006680) 344 267 601 4.1e-39 120.900 Amidohydrolase family MIR (PF02815, IPR016093, SM00472) 186 644 778 1.3e-14 40.700 MIR domain Updated: 2019-02-20 Owner: ChiTaRS	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	1..1446 100.0%	+ 8	SDF2L1 Q9HCN8 NM_022044.2	1445..2242 100.0%	+ 22	2 126 258	exon-exon
5 Homo Sapiens	BF244137 ANNOTATION OF CHIMERA FUSION GenBank ID: BF244137 FASTA Head Gene (1) Alignment: BNIP3L | OMIM: 605368 Tail Gene (2) Alignment: DPYSL2 | OMIM: 602463 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 665 8 - 26073362 26424818 6 0 tumor suppressor, protein-coding 1808 8 - 26629824 26629896 7 0 protein-coding 174 hg38 Updated: 2019-01-04 Owner: ChiTaRS	BNIP3L E5RFE9 H0YBC7 O60238 Q6IBV1 ENST00000520409	1..101 97.7%	- 8	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	102..174 97.7%	- 8	0 48844 55	intron-intron		BREAKPOINTs 29099951
6 Homo Sapiens	BF245263 ANNOTATION OF CHIMERA FUSION GenBank ID: BF245263 FASTA Head Gene (1) Alignment: BNIP3L | OMIM: 605368 Tail Gene (2) Alignment: DPYSL2 | OMIM: 602463 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 665 8 - 26473642 26487400 6 0 tumor suppressor, protein-coding 1808 8 - 26629755 26629896 7 0 protein-coding 524 hg38 Updated: 2019-01-04 Owner: ChiTaRS	BNIP3L E5RFE9 H0YBC7 O60238 Q6IBV1 ENST00000520409	354..382 98.3%	- 8	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	383..524 98.3%	- 8	0 13738 14	intron-intron		BREAKPOINTs 29099951
7 Homo Sapiens	BF244089 ANNOTATION OF CHIMERA FUSION GenBank ID: BF244089 FASTA Head Gene (1) Alignment: BNIP3L | OMIM: 605368 Tail Gene (2) Alignment: DPYSL2 | OMIM: 602463 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 665 8 - 26473642 26473662 6 0 tumor suppressor, protein-coding 1808 8 - 26629769 26629896 7 0 protein-coding 602 hg38 Updated: 2019-01-04 Owner: ChiTaRS	BNIP3L E5RFE9 H0YBC7 O60238 Q6IBV1 ENST00000520409	454..474 98.7%	- 8	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	475..602 98.7%	- 8	0 13738 14	intron-intron		BREAKPOINTs 29099951
8 Homo Sapiens	BF245590 ANNOTATION OF CHIMERA FUSION GenBank ID: BF245590 FASTA Head Gene (1) Alignment: PPP2R2A | OMIM: 604941 Tail Gene (2) Alignment: DPYSL2 | OMIM: 602463 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5520 8 - 26235753 26317049 2 0 protein-coding 1808 8 - 26629756 26629896 7 0 protein-coding 534 hg38 Updated: 2019-01-04 Owner: ChiTaRS	PPP2R2A A0A1W2PQI2 E5RFR9 E5RHQ2 E5RIY1 E5RJV1 E5RJV2 P63151 XM_024447187.1	362..393 98.3%	- 8	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	394..534 98.3%	- 8	0 13453 14	intron-intron	4HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - BF245590 PPP2R2A 8 26317048 26317049 26312484 4564 DPYSL2 8 26629756 26629757 26622484 7272 GM12878 (CVCL_7526) 25497547 BF245590 PPP2R2A 8 26317048 26317049 26312484 4564 DPYSL2 8 26629756 26629757 26632484 2727 GM12878 (CVCL_7526) 25497547 BF245590 PPP2R2A 8 26317048 26317049 26322484 5435 DPYSL2 8 26629756 26629757 26622484 7272 GM12878 (CVCL_7526) 25497547 BF245590 PPP2R2A 8 26317048 26317049 26322484 5435 DPYSL2 8 26629756 26629757 26632484 2727 GM12878 (CVCL_7526) 25497547
9 Homo Sapiens	BF244454 ANNOTATION OF CHIMERA FUSION GenBank ID: BF244454 FASTA Head Gene (1) Alignment: PPP2R2A | OMIM: 604941 Tail Gene (2) Alignment: DPYSL2 | OMIM: 602463 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5520 8 - 26235593 26330502 2 0 protein-coding 1808 8 - 26629770 26629896 7 0 protein-coding 539 hg38 Updated: 2019-01-04 Owner: ChiTaRS	PPP2R2A A0A1W2PQI2 E5RFR9 E5RHQ2 E5RIY1 E5RJV1 E5RJV2 P63151 XM_024447187.1	389..407 97.3%	- 8	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001197293.2	408..539 97.3%	- 8	0 13453 14	intron-intron	4HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - BF244454 PPP2R2A 8 26330501 26330502 26322484 8017 DPYSL2 8 26629770 26629771 26622484 7286 GM12878 (CVCL_7526) 25497547 BF244454 PPP2R2A 8 26330501 26330502 26322484 8017 DPYSL2 8 26629770 26629771 26632484 2713 GM12878 (CVCL_7526) 25497547 BF244454 PPP2R2A 8 26330501 26330502 26332484 1982 DPYSL2 8 26629770 26629771 26622484 7286 GM12878 (CVCL_7526) 25497547 BF244454 PPP2R2A 8 26330501 26330502 26332484 1982 DPYSL2 8 26629770 26629771 26632484 2713 GM12878 (CVCL_7526) 25497547
10 Homo Sapiens	EC499552 ANNOTATION OF CHIMERA FUSION GenBank ID: EC499552 FASTA Head Gene (1) Alignment: DPYSL2 | OMIM: 602463 Tail Gene (2) Alignment: SDAD1P1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1808 8 - 26571152 26573830 0 0 protein-coding 157489 8 - 26377730 26377788 0 0 pseudo 95 hg38 Updated: 2019-04-10 Owner: ChiTaRS	DPYSL2 A0A1C7CYX9 A9CQZ2 A9CQZ4 E5RFU4 Q16555 NM_001244604.1	8..36 95.3%	- 8	SDAD1P1 ENST00000650042	37..94 95.3%	- 8	1 0 0	intron-intron	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - EC499552 DPYSL2 8 26573829 26573830 26572484 1345 SDAD1P1 8 26377730 26377731 26372484 5246 GM12878 (CVCL_7526) 25497547 EC499552 DPYSL2 8 26573829 26573830 26582484 8654 SDAD1P1 8 26377730 26377731 26372484 5246 GM12878 (CVCL_7526) 25497547

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