Search Database Collection

Result for the search of Gene Name/NCBI ID(s): 'DIAPH3'

Total of fusion sequences: 28 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

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2
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Organism

Fusion:
Graphical View,
Annotation,
PPI network

Head Gene (1)

Tail Gene (2)

Rank,
Deviation:
Eloc_(x)
Sloc_(y)

Fusion type RNA

Hi-C,
RNAseq,
Mass-spec
evidences

Cancer
Breakpoint,
PubMed(s)

Name(s)₁,
transcript

Start₁..End₁
Ident₁%

Strand₁
Chrom₁

Name(s)₂,
transcript

Start₂..End₂
Ident₂%

Strand₂
Chrom₂

4,5,6

7,19

9,10,11

12,25

13,14,15

1
Homo Sapiens

ChimerDB

AW665284

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW665284 FASTA

Head Gene (1) Alignment: TXN2 \| OMIM: 609063								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
25828	22	+	36467359	36467592	1	1	protein-coding	81624	13	+	60112127	60163759	3	1	protein-coding	478	hg38

Domains of the full fusion		Envelope		E-value	Score	Description
name (Pfam, InterPro, SMART)	length	from	to	E-value	Score	Description
Thioredoxin (PF00085, IPR013766)	104	217	319	7.9e-31	92.400	Thioredoxin
Drf_GBD (PF06371, IPR010473, SM01140)	188	734	918	2.9e-58	182.700	Diaphanous GTPase-binding Domain
Drf_FH3 (PF06367, IPR010472, SM01139)	195	923	1113	1.4e-61	193.700	Diaphanous FH3 Domain
Mito_fiss_reg (PF05308, IPR007972)	244	1115	1262	9.3e-07	15.200	Mitochondrial fission regulator
TPR_MLP1_2 (PF07926, IPR012929)	129	1118	1180	4.9e-06	12.900	TPR/MLP1/MLP2-like protein
FH2 (PF02181, IPR015425, SM00498)	372	1257	1630	9e-118	379.600	Formin Homology 2 Domain
IncA (PF04156, IPR007285)	190	1481	1676	9.6e-05	8.400	IncA protein
Drf_DAD (PF06345, IPR010465)	15	1681	1695	1.7e-11	30.000	DRF Autoregulatory Domain

Updated: 2019-02-20
Owner: ChiTaRS

TXN2

XM_006724226.1

18..251

97.5%

DIAPH3
Q9NSV4

XR_002957478.1

246..478

99.2%

exon-exon

2
Homo Sapiens

BC007300

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC007300 FASTA
UniProtKB: P18754 Regulator of chromosome condensation (Cell cycle regulatory protein) (Chromosome condensation protein 1)
Fusion Gene(s): RCC1 CHC1

Head Gene (1) Alignment: RCC1 \| OMIM: 179710								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
1104	1	+	28506056	28538990	13	1	protein-coding	81624	13	+	60059165	60059186	0	0	protein-coding	2559	hg38

Updated: 2019-12-02
Read-through/trans-splicing
Owner: ChiTaRS

RCC1

NR_030725.1

1..2535

100.0%

DIAPH3
Q9NSV4

XR_002957479.1

2524..2545

100.0%

exon-intron

3
Homo Sapiens

BU960336

ANNOTATION OF CHIMERA FUSION

GenBank ID: BU960336 FASTA

Head Gene (1) Alignment: DIAPH3 \| OMIM: 614567								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
81624	13	-	59774181	59774772	7	1	protein-coding	81624	13	-	59774181	59810924	27	1	protein-coding	454	hg38

Domains of the full fusion		Envelope		E-value	Score	Description
name (Pfam, InterPro, SMART)	length	from	to	E-value	Score	Description
Drf_GBD (PF06371, IPR010473, SM01140)	188	113	297	1.8e-58	183.300	Diaphanous GTPase-binding Domain
Drf_FH3 (PF06367, IPR010472, SM01139)	195	302	492	8.8e-62	194.300	Diaphanous FH3 Domain
TPR_MLP1_2 (PF07926, IPR012929)	129	497	559	3.4e-06	13.400	TPR/MLP1/MLP2-like protein
FH2 (PF02181, IPR015425, SM00498)	372	636	1009	5e-118	380.500	Formin Homology 2 Domain
IMD (PF08397, IPR013606)	219	988	1074	0.00026	6.500	IRSp53/MIM homology domain
FliD_N (PF02465, IPR003481)	97	1029	1084	0.053	0.600	Flagellar hook-associated protein 2 N-terminus
Drf_DAD (PF06345, IPR010465)	15	1060	1074	1.2e-11	30.500	DRF Autoregulatory Domain

Updated: 2019-02-21
Owner: ChiTaRS

DIAPH3
Q9NSV4

XR_002957478.1

1..116

98.3%

DIAPH3
Q9NSV4

XR_002957478.1

105..408

99.4%

65535

exon-exon

4
Homo Sapiens

BF335440

ANNOTATION OF CHIMERA FUSION

GenBank ID: BF335440 FASTA

Head Gene (1) Alignment: R3HDML								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
140902	20	-	44345065	44345245	3	0	protein-coding	81624	13	-	59837703	59837842	24	0	protein-coding	354	hg38

Updated: 2019-02-20
Owner: ChiTaRS

R3HDML
Q9H3Y0

NM_178491.3

16..196

100.0%

DIAPH3
Q9NSV4

XR_001749694.1

193..333

95.0%

intron-intron

5
Homo Sapiens

BF335408

ANNOTATION OF CHIMERA FUSION

GenBank ID: BF335408 FASTA

Head Gene (1) Alignment: R3HDML								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
140902	20	-	44345065	44345245	3	0	protein-coding	81624	13	-	59837712	59837842	24	0	protein-coding	330	hg38

Updated: 2019-02-20
Owner: ChiTaRS

R3HDML
Q9H3Y0

NM_178491.3

15..195

100.0%

DIAPH3
Q9NSV4

XR_001749694.1

192..322

97.0%

intron-intron

6
Homo Sapiens

DL058331

ANNOTATION OF CHIMERA FUSION

GenBank ID: DL058331 FASTA

Head Gene (1) Alignment: DIAPH3 \| OMIM: 614567								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
81624	13	-	59665879	59665978	1	1	protein-coding	81624	13	+	59665972	59666096	28	1	protein-coding	234	hg38

Domains of the full fusion		Envelope		E-value	Score	Description
name (Pfam, InterPro, SMART)	length	from	to	E-value	Score	Description
Drf_GBD (PF06371, IPR010473, SM01140)	188	185	369	2.7e-58	182.800	Diaphanous GTPase-binding Domain
Drf_FH3 (PF06367, IPR010472, SM01139)	195	374	564	1.3e-61	193.800	Diaphanous FH3 Domain
Mito_fiss_reg (PF05308, IPR007972)	244	566	714	1e-06	15.100	Mitochondrial fission regulator
TPR_MLP1_2 (PF07926, IPR012929)	129	569	631	4.6e-06	13.000	TPR/MLP1/MLP2-like protein
FH2 (PF02181, IPR015425, SM00498)	372	708	1081	8.2e-118	379.800	Formin Homology 2 Domain
IncA (PF04156, IPR007285)	190	932	1127	8.9e-05	8.500	IncA protein
Drf_DAD (PF06345, IPR010465)	15	1132	1146	1.6e-11	30.100	DRF Autoregulatory Domain

Updated: 2019-01-29
Owner: ChiTaRS

DIAPH3
Q9NSV4

NM_001042517.1

9..108

97.0%

DIAPH3
Q9NSV4

NM_001042517.1

103..227

100.0%

exon-exon

7
Homo Sapiens

AA947531

ANNOTATION OF CHIMERA FUSION

GenBank ID: AA947531 FASTA

Head Gene (1) Alignment: DIAPH3 \| OMIM: 614567								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
81624	13	-	59665879	59665978	1	1	protein-coding	81624	13	+	59665972	59666096	28	1	protein-coding	234	hg38

Domains of the full fusion		Envelope		E-value	Score	Description
name (Pfam, InterPro, SMART)	length	from	to	E-value	Score	Description
Drf_GBD (PF06371, IPR010473, SM01140)	188	185	369	2.7e-58	182.800	Diaphanous GTPase-binding Domain
Drf_FH3 (PF06367, IPR010472, SM01139)	195	374	564	1.3e-61	193.800	Diaphanous FH3 Domain
Mito_fiss_reg (PF05308, IPR007972)	244	566	714	1e-06	15.100	Mitochondrial fission regulator
TPR_MLP1_2 (PF07926, IPR012929)	129	569	631	4.6e-06	13.000	TPR/MLP1/MLP2-like protein
FH2 (PF02181, IPR015425, SM00498)	372	708	1081	8.2e-118	379.800	Formin Homology 2 Domain
IncA (PF04156, IPR007285)	190	932	1127	8.9e-05	8.500	IncA protein
Drf_DAD (PF06345, IPR010465)	15	1132	1146	1.6e-11	30.100	DRF Autoregulatory Domain

Updated: 2019-02-20
Owner: ChiTaRS

DIAPH3
Q9NSV4

NM_001042517.1

9..108

97.0%

DIAPH3
Q9NSV4

NM_001042517.1

103..227

100.0%

exon-exon

8
Homo Sapiens

CB050805

ANNOTATION OF CHIMERA FUSION

GenBank ID: CB050805 FASTA

Head Gene (1) Alignment: DIAPH3 \| OMIM: 614567								Tail Gene (2) Alignment: LOC642590								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
81624	13	-	59992847	59992869	0	0	protein-coding	642590	6	+	70607750	70608319	1	0	pseudo	557	hg38

Updated: 2019-04-13
Owner: ChiTaRS

DIAPH3
Q9NSV4

XR_002957479.1

3..25

100.0%

LOC642590

20..557

97.4%

intron-intron

9
Homo Sapiens

BG030962

ANNOTATION OF CHIMERA FUSION

GenBank ID: BG030962 FASTA

Head Gene (1) Alignment: MRRF \| OMIM: 604602								Tail Gene (2) Alignment: DIAPH3 \| OMIM: 614567								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
92399	9	+	122285260	122323031	6	1	protein-coding	81624	13	+	59895151	59895454	0	0	protein-coding	837	hg38

Updated: 2019-06-06
Owner: ChiTaRS

MRRF

XR_428543.4

6..760

99.6%

DIAPH3
Q9NSV4

XR_002957479.1

757..818

97.5%

exon-intron

10
Homo Sapiens

N67539

ANNOTATION OF CHIMERA FUSION

GenBank ID: N67539 FASTA

Head Gene (1) Alignment: DIAPH3 \| OMIM: 614567								Tail Gene (2) Alignment: C5orf15								Qsize	UCSC Version
Location:					exons		highlight₁	Location:					exons		highlight₂
Entrez GeneID₁	chromo- some₁	strand₁	start_loc₁	end_loc₁	total₁	overlap₁	highlight₁	Entrez GeneID₂	chromo- some₂	strand₂	start_loc₂	end_loc₂	total₂	overlap₂	highlight₂
18	19	7	20	21	22	23	-	24	25	12	26	27	28	29	-	30	31
81624	13	-	59862240	59862273	2	0	protein-coding	56951	5	+	133955510	133955930	5	0	protein-coding	428	hg38

Updated: 2018-11-18
Owner: ChiTaRS

DIAPH3
Q9NSV4

1..25

100.0%

C5orf15
Q8NC54

6..428

98.6%

intron-intron

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