Result for the search of Gene Name/NCBI ID(s): 'DHX38'

Total of fusion sequences: 6 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs AB209331 ANNOTATION OF CHIMERA FUSION GenBank ID: AB209331 FASTA UniProtKB: Q6PII5 Hydroxyacylglutathione hydrolase-like protein (EC 3.1.2.-) Fusion Gene(s): HAGHL Head Gene (1) Alignment: HAGHL Tail Gene (2) Alignment: DHX38 | OMIM: 605584 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 84264 16 + 727131 728868 7 1 protein-coding 9785 16 + 72112778 72112911 1 1 protein-coding 1083 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Lactamase_B (PF00753, IPR001279, SM00849) 197 148 298 2.6e-14 39.800 Metallo-beta-lactamase superfamily HAGH_C (PF16123, IPR032282) 81 299 320 5.9e-06 13.100 Hydroxyacylglutathione hydrolase C-terminus Updated: 2019-02-20 Owner: ChiTaRS	HAGHL B4DED4 H3BN70 H3BQ57 H3BR74 H3BT20 H3BU61 I3L1B7 I3L1W0 I3L3H5 Q6PII5 NM_001290139.1	1..952 100.0%	+ 16	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	950..1083 100.0%	+ 16	1 0 0	exon-exon
2 Homo Sapiens	SplGraphs BP241442 ANNOTATION OF CHIMERA FUSION GenBank ID: BP241442 FASTA Head Gene (1) Alignment: HSP90AA1 | OMIM: 140571 Tail Gene (2) Alignment: DHX38 | OMIM: 605584 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3320 14 - 102084976 102086079 9 1 oncogene, protein-coding 9785 16 + 72105607 72106078 11 1 protein-coding 571 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to HA2 (PF04408, IPR007502, SM00847) 102 450 538 3.1e-24 71.600 Helicase associated domain (HA2) OB_NTP_bind (PF07717, IPR011709) 114 529 675 3.6e-23 68.100 Oligonucleotide/oligosaccharide-binding (OB)-fold Updated: 2019-02-21 Owner: ChiTaRS	HSP90AA1 A0A0U1RR69 G3V2J8 G3V592 H0YJF5 K9JA46 P07900 Q2VPJ6 Q8TBA7 Q96HX7 NM_001017963.2	1..479 99.2%	- 14	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	480..571 100.0%	+ 16	1 0 0	exon-exon
3 Homo Sapiens	BF852500 ANNOTATION OF CHIMERA FUSION GenBank ID: BF852500 FASTA Head Gene (1) Alignment: CTSD | OMIM: 116840 Tail Gene (2) Alignment: DHX38 | OMIM: 605584 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1509 11 - 1752819 1753021 1 1 protein-coding 9785 16 - 72105609 72107493 11 1 protein-coding 593 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to HA2 (PF04408, IPR007502, SM00847) 102 419 507 2.9e-24 71.700 Helicase associated domain (HA2) OB_NTP_bind (PF07717, IPR011709) 114 496 644 3.4e-23 68.200 Oligonucleotide/oligosaccharide-binding (OB)-fold Updated: 2019-02-17 Owner: ChiTaRS	CTSD A0A0S2Z3L4 A0A1B0GV01 A0A1B0GV23 A0A1B0GVD5 A0A1B0GVP3 A0A1B0GW44 A0A1B0GWE8 C9JH19 F8W787 F8WD96 H7C1V0 P07339 V9HWI3 NM_001909.4	112..313 98.1%	- 11	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	308..593 96.9%	- 16	1 0 0	exon-exon
4 Homo Sapiens	BF927490 ANNOTATION OF CHIMERA FUSION GenBank ID: BF927490 FASTA Head Gene (1) Alignment: ATP11A | OMIM: 605868 Tail Gene (2) Alignment: DHX38 | OMIM: 605584 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23250 13 + 112859400 112860351 24 1 protein-coding 9785 16 - 72096253 72096365 27 1 protein-coding 214 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF2956 (PF11169, IPR021339) 102 1060 1130 0.04 0.400 Protein of unknown function (DUF2956) Nucleo_P87 (PF07267, IPR009893) 650 1316 1484 0.0014 3.500 Nucleopolyhedrovirus capsid protein P87 DEAD (PF00270, IPR011545) 176 1465 1624 5.7e-11 28.600 DEAD/DEAH box helicase Helicase_C (PF00271, IPR001650, SM00490) 111 1655 1791 2.9e-17 49.400 Helicase conserved C-terminal domain HA2 (PF04408, IPR007502, SM00847) 102 1853 1941 1.1e-23 69.800 Helicase associated domain (HA2) OB_NTP_bind (PF07717, IPR011709) 114 1940 2078 1.5e-22 66.100 Oligonucleotide/oligosaccharide-binding (OB)-fold Updated: 2019-02-20 Owner: ChiTaRS	ATP11A A0A087WVE8 A2A3G9 E9PEJ6 H0Y547 H0Y624 H0Y8F0 L8E8N1 L8EAS3 P98196 Q6PJ25 XM_005268306.4	1..116 99.2%	+ 13	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	102..214 99.2%	- 16	1 0 0	exon-exon
5 Homo Sapiens	BF895636 ANNOTATION OF CHIMERA FUSION GenBank ID: BF895636 FASTA Head Gene (1) Alignment: DHX38 | OMIM: 605584 Tail Gene (2) Alignment: DHX38 | OMIM: 605584 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9785 16 - 72111027 72112483 27 1 protein-coding 9785 16 + 72112483 72112731 2 1 protein-coding 378 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF1764 (PF08576, IPR013885) 101 49 117 0.053 0.700 Eukaryotic protein of unknown function (DUF1764) DUF2956 (PF11169, IPR021339) 102 141 200 0.033 0.700 Protein of unknown function (DUF2956) Nucleo_P87 (PF07267, IPR009893) 650 345 558 0.00098 4.100 Nucleopolyhedrovirus capsid protein P87 DEAD (PF00270, IPR011545) 176 535 694 3.1e-11 29.500 DEAD/DEAH box helicase Helicase_C (PF00271, IPR001650, SM00490) 111 724 861 1.5e-17 50.200 Helicase conserved C-terminal domain HA2 (PF04408, IPR007502, SM00847) 102 923 1011 6.5e-24 70.600 Helicase associated domain (HA2) OB_NTP_bind (PF07717, IPR011709) 114 1008 1148 8.3e-23 67.000 Oligonucleotide/oligosaccharide-binding (OB)-fold Updated: 2019-02-20 Owner: ChiTaRS	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	7..131 96.0%	- 16	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	129..378 98.0%	+ 16	1 0 0	exon-exon
6 Homo Sapiens	AW602941 ANNOTATION OF CHIMERA FUSION GenBank ID: AW602941 FASTA Head Gene (1) Alignment: DHX38 | OMIM: 605584 Tail Gene (2) Alignment: LOC101927151 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9785 16 + 72108324 72108878 3 1 protein-coding 101927151 19 - 27806809 27806898 0 0 ncRNA 442 hg38 Updated: 2019-11-28 Owner: ChiTaRS	DHX38 B4DM30 H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 XM_011523484.2	11..374 96.7%	+ 16	LOC101927151 NR_146735.1	356..442 98.8%	- 19	1 0 0	exon-intron

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