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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Cxcl12'

Total of fusion sequences: 6 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_013655.4
1..427
100.0%
+
6

NM_001077499.2
422..576
98.8%
+
15
1
0
0
exon-exon
2
Mus musculus

NM_021704.3
1..1772
100.0%
+
6

XM_006503984.3
1323..1792
96.1%
-
5
0
0
5924
exon-intron
3
Mus musculus

XM_006503984.3
1..523
97.8%
+
5

NM_021704.3
20..578
100.0%
-
6
0
0
5924
intron-exon
4
Mus musculus

NM_013655.4
20..673
99.0%
+
6

NM_001159604.1
666..694
100.0%
-
4
1
0
0
exon-intron
5
Mus musculus

NM_021704.3
48..511
99.8%
+
6
Gm40123
XR_867567.2
511..536
100.0%
-
3
1
0
0
exon-intron
6
Mus musculus

NM_021704.3
1..1772
100.0%
+
6

NM_001288618.1
1769..1807
100.0%
-
6
1
0
0
exon-intron

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