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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ctsa'

Total of fusion sequences: 7 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_133705.2
1..82
100.0%
+
1

NM_008906.4
78..195
99.2%
+
2
1
0
0
exon-exon
2
Mus musculus

NM_008906.4
13..390
100.0%
+
2

ENSMUST00000107188
309..525
95.9%
-
4
1
0
0
exon-intron
3
Mus musculus
4921515E04Rik
NR_045711.1
1..32
100.0%
+
15

NM_008906.4
32..863
96.4%
-
2
1
0
0
intron-exon
4
Mus musculus

NM_175006.2
1..40
96.9%
-
13

NM_008906.4
19..330
100.0%
+
2
1
0
0
intron-exon
5
Mus musculus

NM_146041.2
9..36
96.5%
+
13

NM_008906.4
32..600
100.0%
-
2
1
0
0
intron-exon
6
Mus musculus

NM_008906.4
1..464
98.1%
+
2

XM_017319933.1
450..471
100.0%
+
4
1
0
0
exon-intron
7
Mus musculus

NM_008906.4
1..340
100.0%
+
2

NM_011348.2
340..382
100.0%
-
5
1
0
0
exon-intron

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