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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Colec12'

Total of fusion sequences: 19 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_001003934.2
4..149
100.0%
-
19

NM_130449.2
146..236
100.0%
+
18
1
0
0
intron-exon
2
Mus musculus
SplGraphs
NM_130449.2
1..65
98.5%
+
18

XM_011240287.2
55..508
100.0%
+
3
1
0
0
exon-exon
3
Mus musculus

NM_025988.2
16..1996
100.0%
+
11

NM_130449.2
1995..2015
100.0%
-
18
1
0
0
exon-intron
4
Mus musculus

NM_130449.2
1..3314
100.0%
+
18

XM_006541404.1
3305..3344
95.5%
-
X
1
0
0
exon-intron
5
Mus musculus

XM_011249897.1
1..2570
100.0%
+
4

NM_130449.2
2566..2598
97.0%
-
18
1
0
0
exon-intron
6
Mus musculus

XM_006533886.3
13..2037
100.0%
+
11

NM_130449.2
2025..2058
96.5%
-
18
1
0
0
exon-intron
7
Mus musculus

NM_130449.2
1..31
96.3%
+
18

XM_006532438.3
16..871
97.2%
+
11
1
0
0
intron-intron
8
Mus musculus
Thtpa
Q8JZL3

NM_153083.5
1..680
100.0%
+
14

NM_130449.2
678..699
100.0%
-
18
1
0
0
exon-intron
9
Mus musculus

NM_023333.4
12..351
100.0%
-
6

NM_130449.2
181..368
97.4%
-
18
1
0
0
exon-intron
10
Mus musculus

NM_130449.2
1..1969
100.0%
+
18

NM_023821.3
1323..2012
95.9%
+
13
1
0
0
exon-intron

T o p