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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Col4a2'

Total of fusion sequences: 16 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001846.3
1..387
99.0%
+
13

XM_024449426.1
387..2060
99.9%
-
13
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_001846.3
1..387
99.0%
+
13

XM_024449426.1
387..527
100.0%
-
13
1
0
0
exon-exon
3
Homo Sapiens

NM_001846.3
2..268
98.5%
+
13

NM_001846.3
263..446
99.0%
+
13
1
0
0
intron-exon
4
Mus musculus

XR_375571.3
1..1105
100.0%
+
3

NM_009932.4
1091..1113
100.0%
+
8
1
0
0
exon-intron
5
Homo Sapiens

NM_001846.3
1..24
100.0%
-
13
MT-CO1
19..126
100.0%
-
MT
1
0
0
intron-exon
6
Homo Sapiens

NM_001294145.1
1..315
98.8%
+
2

NM_001846.3
312..335
95.9%
+
13
1
0
0
exon-intron
7
Mus musculus
Svs4
P18419

NM_009300.3
20..598
99.5%
-
2

NM_009932.4
592..617
100.0%
-
8
1
0
0
exon-intron
8
Homo Sapiens

NM_001846.3
1..628
99.6%
+
13

XM_017015617.1
628..647
100.0%
+
10
1
0
0
exon-intron
9
Homo Sapiens

NM_001353346.2
1..54
98.2%
+
1

NM_001846.3
49..159
98.2%
-
13
1
0
0
exon-exon
10
Mus musculus

NR_130973.1
1..160
98.8%
-
7

NM_009932.4
152..374
99.6%
+
8
1
0
0
exon-exon

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