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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Col4a2'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
XR_375571.3
1..1105
100.0%
+
3

NM_009932.4
1091..1113
100.0%
+
8
1
0
0
exon-intron
Mus musculus Svs4
P18419

NM_009300.3
20..598
99.5%
-
2

NM_009932.4
592..617
100.0%
-
8
1
0
0
exon-intron
Mus musculus
NR_130973.1
1..160
98.8%
-
7

NM_009932.4
152..374
99.6%
+
8
1
0
0
exon-exon
Mus musculus
NM_009932.4
43..856
97.2%
+
8

NM_178641.5
852..875
100.0%
+
7
1
0
0
exon-intron
Mus musculus
NM_009932.4
8..108
97.3%
+
8

NM_027827.3
70..196
99.3%
+
11
1
0
0
intron-exon

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