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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Col25a1'

Total of fusion sequences: 8 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
XR_376326.1
1..803
100.0%
+
4

XM_006502266.3
801..832
96.9%
-
3
1
0
0
exon-intron
Mus musculus
XM_006502266.3
1..719
100.0%
+
3

XM_011239829.2
716..737
100.0%
+
2
1
0
0
exon-intron
Mus musculus
XM_006502266.3
1..1469
100.0%
+
3
Gm10154 1467..1897
99.6%
-
4
1
0
0
exon-intron
Mus musculus
XM_006502266.3
1..24
100.0%
+
3

NM_145393.4
22..570
99.5%
+
4
1
0
0
intron-exon
Mus musculus
NM_027633.3
1..1150
100.0%
-
6

XM_006502266.3
1150..1180
96.8%
-
3
1
0
0
exon-intron
Mus musculus
ENSMUST00000183368
1..40
97.5%
+
3

XM_006502449.3
10..469
98.7%
+
3
1
0
0
intron-exon
Mus musculus Tuba1a
P68369

NM_011653.2
37..383
99.5%
-
15

XM_006502266.3
383..410
100.0%
-
3
1
0
0
exon-intron
Mus musculus 114..133
100.0%
+
15
121..142
95.5%
-
3
1
0
0
exon-exon

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