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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Col1a2'

Total of fusion sequences: 25 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculusSplGraphs
NM_007743.3
1..79
100.0%
+
6

NM_007743.3
79..592
100.0%
+
6
0
14686
18206
exon-exon
Mus musculusSplGraphs
XM_011247157.1
1..226
100.0%
-
19

NM_007743.3
221..552
99.7%
+
6
1
0
0
exon-exon
Mus musculusSplGraphs
NM_001159417.1
1..315
100.0%
+
14

NM_007743.3
307..689
98.2%
+
6
1
0
0
exon-exon
Mus musculus
NM_007743.3
1..93
100.0%
+
6

NM_007743.3
90..325
100.0%
+
6
0
1916
1164
exon-exon
Mus musculus
NM_007743.3
1..93
97.9%
-
6

NM_007743.3
87..471
99.8%
+
6
0
1916
1164
exon-exon
Mus musculus
NM_007743.3
5..2050
99.9%
+
6

XM_006509636.3
1771..2091
98.5%
+
8
2
20
0
exon-intron
Mus musculus
XM_006509636.3
1..260
97.9%
-
8

NM_007743.3
4..475
99.2%
-
6
2
20
0
intron-exon
Mus musculus
XM_006533154.2
1..84
100.0%
-
11

NM_007743.3
84..803
98.9%
+
6
1
0
0
exon-exon
Mus musculus
NM_007743.3
31..630
99.9%
+
6

NM_001253354.1
616..706
95.7%
-
4
1
0
0
exon-intron
Mus musculus
NM_007743.3
37..391
99.5%
+
6

NM_001206382.1
165..462
95.9%
+
2
1
0
0
exon-intron

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