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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Chd3'

Total of fusion sequences: 8 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
XM_006532882.1
1..3723
100.0%
-
11

XM_006532882.1
3717..4083
99.8%
-
11
1
0
0
exon-exon
2
Mus musculus
SplGraphs
NM_007509.3
1..342
99.2%
+
8

XM_006532882.1
337..471
99.3%
-
11
1
0
0
exon-exon
3
Mus musculus
3110039I08Rik
Q3URL6

NR_040725.2
1..187
100.0%
+
9

XM_006532882.1
186..456
99.7%
-
11
3
0
5
intron-exon
4
Mus musculus
3110039I08Rik
Q3URL6

NR_040725.2
1..185
99.5%
+
9

XM_006532882.1
184..459
99.3%
-
11
3
0
5
intron-exon
5
Mus musculus
3110039I08Rik
Q3URL6

NR_040725.2
2..187
100.0%
+
9

XM_006532882.1
186..432
99.6%
-
11
3
0
24
intron-exon
6
Mus musculus

NM_009920.4
22..197
97.3%
+
19

XM_006532882.1
190..299
100.0%
-
11
1
0
0
exon-exon
7
Mus musculus

XM_006532882.1
1..133
100.0%
-
11
Erv3
Q9DAX3

XM_006500202.2
127..752
100.0%
-
2
1
0
0
intron-exon
8
Mus musculus

XM_006532882.1
22..280
99.3%
-
11

NM_009099.2
280..378
100.0%
+
7
1
0
0
exon-intron

T o p