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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Chd3'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001353423.1
1..404
100.0%
+
20

XM_017024066.1
399..547
100.0%
+
17
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
XM_005256429.4
1..72
100.0%
+
17

NM_001493.2
69..522
100.0%
+
X
1
0
0
exon-exon
3
Homo Sapiens
SplGraphs
XM_011513098.2
2..376
99.8%
+
3

XM_005256429.4
377..620
100.0%
+
17
1
0
0
intron-exon
4
Homo Sapiens
SLC25A35
Q3KQZ1

XM_024450748.1
9..362
98.1%
+
17

XM_017024066.1
360..433
100.0%
-
17
2
0
7
exon-exon
5
Homo Sapiens
SLC25A35
Q3KQZ1

XM_024450748.1
2..362
99.8%
+
17

XM_017024066.1
360..433
100.0%
-
17
2
0
7
exon-exon
6
Homo Sapiens

XM_011513098.2
8..382
98.7%
+
3

XM_005256429.4
383..1576
98.0%
+
17
1
0
0
intron-exon
7
Homo Sapiens

XM_017024066.1
7..412
99.6%
-
17

NM_004539.3
408..605
99.0%
+
18
1
0
0
exon-exon
8
Homo Sapiens

NM_001330158.1
1..20
100.0%
-
2

XM_017024067.2
5..93
100.0%
-
17
1
0
0
intron-exon
9
Homo Sapiens

XM_017024066.1
10..241
98.3%
-
17

XM_017024066.1
238..391
99.4%
-
17
1
0
0
exon-exon
10
Homo Sapiens

XM_017024066.1
31..218
99.5%
-
17

NM_001329138.1
210..571
98.7%
+
1
1
0
0
exon-intron

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