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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Cdc37'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC060079 FASTA
UniProtKB: Q61081 Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting subunit) (p50Cdc37) [Cleaved into: Hsp90 co-chaperone Cdc37, N-terminally processed]
Fusion Gene(s): Cdc37
Head Gene (1) Alignment: Cdc37 Tail Gene (2) Alignment: Gm34889 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
125399-211394312114992981protein-coding1026382892-14710144914710152210 1667 mm10
Updated: 2019-06-15
Owner: ChiTaRS
NM_016742.4		1..1589
100.0%		-
9		 Gm34889
XR_001783499.1		1556..1620
97.0%		-
2		0
9103
0		exon-intron
2
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BU754834 FASTA
Head Gene (1) Alignment: Gm34889 Tail Gene (2) Alignment: Cdc37 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1026382892+14710147114710153511125399+211394312113963111protein-coding 217 mm10
Updated: 2019-06-12
Owner: ChiTaRS
Gm34889
XR_001783499.1		1..63
95.3%		+
2
XM_006509967.1		17..217
100.0%		+
9		0
1198
3		exon-exon
3
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW826020 FASTA
Head Gene (1) Alignment: Gm34889 Tail Gene (2) Alignment: Cdc37 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1026382892+14710144914710152211125399+211394312114082621protein-coding 610 mm10
Updated: 2019-06-15
Owner: ChiTaRS
Gm34889
XR_001783499.1		1..42
100.0%		+
2
XM_006509967.1		9..610
100.0%		+
9		0
1015
0		exon-exon
4
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW986587 FASTA
Head Gene (1) Alignment: Gm34889 Tail Gene (2) Alignment: Cdc37 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1026382892+14710144914710153511125399+211394302113981111protein-coding 392 mm10
Updated: 2019-06-15
Owner: ChiTaRS
Gm34889
XR_001783499.1		1..57
98.3%		+
2
XM_006509967.1		10..391
97.4%		+
9		0
1015
0		exon-exon
5
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BG089856 FASTA
Head Gene (1) Alignment: Gm34889 Tail Gene (2) Alignment: Cdc37 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1026382892+14710147414710153511125399+211394312114082921protein-coding 678 mm10
Updated: 2019-06-12
Owner: ChiTaRS
Gm34889
XR_001783499.1		1..60
95.0%		+
2
XM_006509967.1		14..619
96.3%		+
9		0
3
25		exon-exon
6
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BI851662 FASTA
Head Gene (1) Alignment: Col1a1 Tail Gene (2) Alignment: Cdc37 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1284211+949424179494340751protein-coding125399-211420132114311941protein-coding 827 mm10
Updated: 2019-05-28
Owner: ChiTaRS
NM_007742.4		4..308
100.0%		+
11
NM_016742.4		303..825
98.5%		-
9		1
0
0		exon-exon
7
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: CN839685 FASTA
Head Gene (1) Alignment: Prm2 Tail Gene (2) Alignment: Cdc37 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1911916-107913841079210221125399-211338882113391511protein-coding 706 mm10
Updated: 2019-06-11
Owner: ChiTaRS
NM_008933.2		4..615
100.0%		-
16
ENSMUST00000019615		615..641
100.0%		-
9		1
0
0		exon-exon
8
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BE854558 FASTA
Head Gene (1) Alignment: Cdc37 Tail Gene (2) Alignment: Gm34745 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
125399-211431892114989621protein-coding10263810212-511333405113356600 408 mm10
Updated: 2019-06-14
Owner: ChiTaRS
NM_016742.4		10..187
100.0%		-
9		 Gm34745
XR_872744.2		179..405
97.0%		-
12		1
0
0		exon-intron

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