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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ccr9'

Total of fusion sequences: 4 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_001166625.1
41..82
97.0%
+
9

XM_006534505.3
63..410
100.0%
-
11
1
0
0
intron-intron
2
Mus musculus

NM_139142.2
1..611
100.0%
+
9

ENSMUST00000168910
612..688
100.0%
+
9
1
0
0
exon-intron
3
Mus musculus

ENSMUST00000168910
613..693
100.0%
+
9

NM_033322.2
694..2022
100.0%
+
9
1
0
0
intron-exon
4
Mus musculus

XM_011247453.2
13..670
99.4%
+
X

ENSMUST00000168910
528..719
95.2%
-
9
1
0
0
exon-intron

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