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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Cacna2d1'

Total of fusion sequences: 29 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
XM_011249744.2
1..68
100.0%
+
5

XM_006511833.1
69..365
100.0%
+
9
1
0
0
intron-exon
2
Mus musculus
SplGraphs
XM_011249744.2
1..436
99.6%
+
5

XM_011249744.2
431..519
100.0%
+
5
1
0
0
intron-intron
3
Mus musculus

NM_001002004.2
1..4787
100.0%
+
11

XM_011249744.2
4112..4799
98.0%
-
5
0
25
18030
exon-intron
4
Mus musculus

XM_011249744.2
1..664
96.5%
+
5

NM_001002004.2
10..734
97.9%
-
11
0
25
18030
intron-exon
5
Mus musculus

XM_006509148.2
20..341
99.4%
-
8

XM_011249744.2
329..363
100.0%
-
5
1
0
0
exon-intron
6
Mus musculus

XM_011249744.2
1..101
100.0%
+
5
Ybey
Q8CAV0

NM_172550.4
20..242
99.6%
+
10
1
0
0
intron-exon
7
Mus musculus

NM_026644.2
19..358
100.0%
-
17

XM_011249744.2
353..438
97.7%
+
5
1
0
0
exon-exon
8
Mus musculus
Sart3
Q9JLI8

XM_017320991.1
29..359
97.9%
+
5

XM_011249744.2
345..374
100.0%
-
5
1
0
0
intron-intron
9
Mus musculus

NM_021363.2
35..459
99.6%
+
2

XM_011249744.2
459..486
100.0%
-
5
1
0
0
exon-intron
10
Mus musculus
H3f3a-ps2 46..562
99.7%
-
16

XM_011249744.2
545..573
100.0%
-
5
1
0
0
exon-intron

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