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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Cacna2d1'

Total of fusion sequences: 39 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
XM_011249744.2
1..68
100.0%
+
5

XM_006511833.1
69..365
100.0%
+
9
1
0
0
intron-exon
2
Mus musculus
SplGraphs
XM_011249744.2
1..436
99.6%
+
5

XM_011249744.2
431..519
100.0%
+
5
1
0
0
intron-intron
3
Homo Sapiens

XM_011516571.3
1..173
100.0%
-
7

XM_011516571.3
171..265
100.0%
+
7
0
7382
7456
intron-intron
4
Homo Sapiens

XM_011516571.3
16..71
100.0%
+
7

XM_011516571.3
58..331
96.7%
-
7
2
0
3
intron-intron
5
Homo Sapiens

XM_011516571.3
19..71
100.0%
+
7

XM_011516571.3
58..226
97.7%
-
7
2
0
3
intron-intron
6
Homo Sapiens

XM_017012811.2
11..201
100.0%
-
7

XM_011516571.3
200..402
100.0%
+
7
1
0
0
exon-exon
7
Mus musculus

NM_001002004.2
1..4787
100.0%
+
11

XM_011249744.2
4112..4799
98.0%
-
5
0
25
18030
exon-intron
8
Homo Sapiens
17..100
98.9%
-
7
100..306
100.0%
-
7
0
65535
65535
exon-exon
9
Homo Sapiens

XM_011516571.3
1..273
100.0%
+
7

XM_011516571.3
273..418
97.3%
-
7
0
65535
65535
intron-exon
10
Mus musculus

XM_011249744.2
1..664
96.5%
+
5

NM_001002004.2
10..734
97.9%
-
11
0
25
18030
intron-exon

T o p